Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 SNX5-217ENST00000606557 1087 ntBASIC21.3■■□□□ 1
CDK9P50750 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CDK9P50750 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDK9P50750 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.29■■□□□ 1
CDK9P50750 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CDK9P50750 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDK9P50750 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.29■■□□□ 1
CDK9P50750 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.29■■□□□ 1
CDK9P50750 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDK9P50750 AC092068.2-201ENST00000590491 1708 ntBASIC21.29■■□□□ 1
CDK9P50750 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.28■■□□□ 1
CDK9P50750 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.28■■□□□ 1
CDK9P50750 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.28■■□□□ 1
CDK9P50750 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDK9P50750 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDK9P50750 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
CDK9P50750 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.27■■□□□ 1
CDK9P50750 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.27■■□□□ 1
CDK9P50750 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.27■■□□□ 1
CDK9P50750 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDK9P50750 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.27■■□□□ 1
CDK9P50750 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDK9P50750 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDK9P50750 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.27■□□□□ 0.99
CDK9P50750 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
CDK9P50750 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDK9P50750 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDK9P50750 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK9P50750 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.26■□□□□ 0.99
CDK9P50750 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.26■□□□□ 0.99
CDK9P50750 MIR4787-201ENST00000607364 84 ntBASIC21.26■□□□□ 0.99
CDK9P50750 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK9P50750 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK9P50750 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDK9P50750 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDK9P50750 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDK9P50750 DUSP8P3-201ENST00000399571 1760 ntBASIC21.25■□□□□ 0.99
CDK9P50750 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK9P50750 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.25■□□□□ 0.99
CDK9P50750 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.25■□□□□ 0.99
CDK9P50750 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDK9P50750 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 AC021242.3-201ENST00000607598 1377 ntBASIC21.24■□□□□ 0.99
CDK9P50750 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK9P50750 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.24■□□□□ 0.99
CDK9P50750 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.24■□□□□ 0.99
CDK9P50750 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.24■□□□□ 0.99
CDK9P50750 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.24■□□□□ 0.99
CDK9P50750 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDK9P50750 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDK9P50750 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.23■□□□□ 0.99
CDK9P50750 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDK9P50750 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CDK9P50750 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CDK9P50750 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.23■□□□□ 0.99
CDK9P50750 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.23■□□□□ 0.99
CDK9P50750 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CDK9P50750 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDK9P50750 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms