Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 PRX1YBL064C 786 nt4.65□□□□□ -1.67
UPF3P48412 MAP2YBL091C 1266 nt4.65□□□□□ -1.67
UPF3P48412 WRS1YOL097C 1299 nt4.65□□□□□ -1.67
UPF3P48412 CUE5YOR042W 1236 nt4.65□□□□□ -1.67
UPF3P48412 snR37snR37 386 nt4.65□□□□□ -1.67
UPF3P48412 FAP1YNL023C 2898 nt4.65□□□□□ -1.67
UPF3P48412 SWP82YFL049W 1872 nt4.64□□□□□ -1.67
UPF3P48412 YHB1YGR234W 1200 nt4.64□□□□□ -1.67
UPF3P48412 PEX21YGR239C 867 nt4.64□□□□□ -1.67
UPF3P48412 DCS1YLR270W 1053 nt4.64□□□□□ -1.67
UPF3P48412 MRP21YBL090W 534 nt4.64□□□□□ -1.67
UPF3P48412 MDR1YGR100W 2853 nt4.64□□□□□ -1.67
UPF3P48412 THS1YIL078W 2205 nt4.64□□□□□ -1.67
UPF3P48412 KAR2YJL034W 2049 nt4.63□□□□□ -1.67
UPF3P48412 SEG2YKL105C 3399 nt4.63□□□□□ -1.67
UPF3P48412 UGA3YDL170W 1587 nt4.63□□□□□ -1.67
UPF3P48412 YDL124WYDL124W 939 nt4.63□□□□□ -1.67
UPF3P48412 MPC1YGL080W 393 nt4.63□□□□□ -1.67
UPF3P48412 YAL044W-AYAL044W-A 333 nt4.63□□□□□ -1.67
UPF3P48412 CKB2YOR039W 777 nt4.63□□□□□ -1.67
UPF3P48412 HSP26YBR072W 645 nt4.63□□□□□ -1.67
UPF3P48412 TOM5YPR133W-A 153 nt4.63□□□□□ -1.67
UPF3P48412 CAF4YKR036C 1932 nt4.63□□□□□ -1.67
UPF3P48412 RVB1YDR190C 1392 nt4.63□□□□□ -1.67
UPF3P48412 TUB2YFL037W 1374 nt4.63□□□□□ -1.67
UPF3P48412 CRT10YOL063C 2874 nt4.63□□□□□ -1.67
UPF3P48412 RDH54YBR073W 2877 nt4.63□□□□□ -1.67
UPF3P48412 SAT4YCR008W 1812 nt4.62□□□□□ -1.67
UPF3P48412 YCR101CYCR101C 549 nt4.62□□□□□ -1.67
UPF3P48412 YDR161WYDR161W 1164 nt4.62□□□□□ -1.67
UPF3P48412 YDR290WYDR290W 330 nt4.62□□□□□ -1.67
UPF3P48412 CIR1YGR207C 786 nt4.62□□□□□ -1.67
UPF3P48412 FMP33YJL161W 543 nt4.62□□□□□ -1.67
UPF3P48412 YMR130WYMR130W 909 nt4.62□□□□□ -1.67
UPF3P48412 RRP40YOL142W 723 nt4.62□□□□□ -1.67
UPF3P48412 TMA16YOR252W 537 nt4.62□□□□□ -1.67
UPF3P48412 HOT1YMR172W 2160 nt4.62□□□□□ -1.67
UPF3P48412 IDS2YJL146W 1410 nt4.62□□□□□ -1.67
UPF3P48412 TDA3YHR009C 1572 nt4.61□□□□□ -1.67
UPF3P48412 TAF12YDR145W 1620 nt4.61□□□□□ -1.67
UPF3P48412 YCL075WYCL075W 441 nt4.61□□□□□ -1.67
UPF3P48412 NUS1YDL193W 1128 nt4.61□□□□□ -1.67
UPF3P48412 MAF1YDR005C 1188 nt4.61□□□□□ -1.67
UPF3P48412 RPL34AYER056C-A 366 nt4.61□□□□□ -1.67
UPF3P48412 RMR1YGL250W 726 nt4.61□□□□□ -1.67
UPF3P48412 POP6YGR030C 477 nt4.61□□□□□ -1.67
UPF3P48412 ARC15YIL062C 465 nt4.61□□□□□ -1.67
UPF3P48412 YAL056C-AYAL056C-A 351 nt4.61□□□□□ -1.67
UPF3P48412 PNP1YLR209C 936 nt4.61□□□□□ -1.67
UPF3P48412 YMR306C-AYMR306C-A 390 nt4.61□□□□□ -1.67
UPF3P48412 SER33YIL074C 1410 nt4.61□□□□□ -1.67
UPF3P48412 SLM5YCR024C 1479 nt4.61□□□□□ -1.67
UPF3P48412 GZF3YJL110C 1656 nt4.61□□□□□ -1.67
UPF3P48412 MDM30YLR368W 1797 nt4.6□□□□□ -1.67
UPF3P48412 MPS3YJL019W 2049 nt4.6□□□□□ -1.67
UPF3P48412 SKG1YKR100C 1068 nt4.6□□□□□ -1.67
UPF3P48412 INA17YPL099C 549 nt4.6□□□□□ -1.67
UPF3P48412 MAK3YPR051W 531 nt4.6□□□□□ -1.67
UPF3P48412 DRN1YGR093W 1524 nt4.6□□□□□ -1.67
UPF3P48412 CLN2YPL256C 1638 nt4.6□□□□□ -1.67
UPF3P48412 LAS21YJL062W 2493 nt4.6□□□□□ -1.67
UPF3P48412 NOP16YER002W 696 nt4.59□□□□□ -1.67
UPF3P48412 HOM3YER052C 1584 nt4.59□□□□□ -1.67
UPF3P48412 SPB4YFL002C 1821 nt4.59□□□□□ -1.67
UPF3P48412 SUT1YGL162W 900 nt4.59□□□□□ -1.67
UPF3P48412 CTT1YGR088W 1689 nt4.59□□□□□ -1.67
UPF3P48412 YGR149WYGR149W 1299 nt4.59□□□□□ -1.67
UPF3P48412 YAP1802YGR241C 1707 nt4.59□□□□□ -1.67
UPF3P48412 NMD4YLR363C 657 nt4.59□□□□□ -1.67
UPF3P48412 EOS1YNL080C 1101 nt4.59□□□□□ -1.67
UPF3P48412 HRR25YPL204W 1485 nt4.59□□□□□ -1.67
UPF3P48412 SPS2YDR522C 1509 nt4.58□□□□□ -1.68
UPF3P48412 PUT1YLR142W 1431 nt4.58□□□□□ -1.68
UPF3P48412 TFC7YOR110W 1308 nt4.58□□□□□ -1.68
UPF3P48412 OPT2YPR194C 2634 nt4.58□□□□□ -1.68
UPF3P48412 YEL045CYEL045C 426 nt4.58□□□□□ -1.68
UPF3P48412 ADH4YGL256W 1149 nt4.58□□□□□ -1.68
UPF3P48412 BET1YIL004C 429 nt4.58□□□□□ -1.68
UPF3P48412 PEX22YAL055W 543 nt4.58□□□□□ -1.68
UPF3P48412 MMM1YLL006W 1281 nt4.58□□□□□ -1.68
UPF3P48412 CDC73YLR418C 1182 nt4.58□□□□□ -1.68
UPF3P48412 YBL094CYBL094C 333 nt4.58□□□□□ -1.68
UPF3P48412 IAH1YOR126C 717 nt4.58□□□□□ -1.68
UPF3P48412 IRC14YOR135C 342 nt4.58□□□□□ -1.68
UPF3P48412 YDC1YPL087W 954 nt4.58□□□□□ -1.68
UPF3P48412 YPL199CYPL199C 723 nt4.58□□□□□ -1.68
UPF3P48412 YBR255C-AYBR255C-A 363 nt4.58□□□□□ -1.68
UPF3P48412 YER077CYER077C 2067 nt4.58□□□□□ -1.68
UPF3P48412 SUP35YDR172W 2058 nt4.57□□□□□ -1.68
UPF3P48412 VID22YLR373C 2706 nt4.57□□□□□ -1.68
UPF3P48412 IMP3YHR148W 552 nt4.57□□□□□ -1.68
UPF3P48412 TIF34YMR146C 1044 nt4.57□□□□□ -1.68
UPF3P48412 YNL134CYNL134C 1131 nt4.57□□□□□ -1.68
UPF3P48412 YOL166CYOL166C 339 nt4.57□□□□□ -1.68
UPF3P48412 BMT2YBR141C 1014 nt4.57□□□□□ -1.68
UPF3P48412 GRX1YCL035C 333 nt4.57□□□□□ -1.68
UPF3P48412 PGM2YMR105C 1710 nt4.57□□□□□ -1.68
UPF3P48412 SKG3YLR187W 3081 nt4.57□□□□□ -1.68
UPF3P48412 RRP3YHR065C 1506 nt4.56□□□□□ -1.68
UPF3P48412 MSN4YKL062W 1893 nt4.56□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 39 ms