Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd44P15379 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cd44P15379 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.87■□□□□ 0.93
Cd44P15379 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cd44P15379 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd44P15379 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cd44P15379 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.86■□□□□ 0.93
Cd44P15379 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cd44P15379 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.86■□□□□ 0.93
Cd44P15379 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd44P15379 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd44P15379 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd44P15379 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.85■□□□□ 0.93
Cd44P15379 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cd44P15379 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd44P15379 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd44P15379 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd44P15379 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.85■□□□□ 0.93
Cd44P15379 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd44P15379 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd44P15379 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cd44P15379 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cd44P15379 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd44P15379 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd44P15379 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.83■□□□□ 0.93
Cd44P15379 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd44P15379 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd44P15379 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.83■□□□□ 0.93
Cd44P15379 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd44P15379 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.83■□□□□ 0.93
Cd44P15379 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd44P15379 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.82■□□□□ 0.92
Cd44P15379 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.82■□□□□ 0.92
Cd44P15379 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.82■□□□□ 0.92
Cd44P15379 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Cd44P15379 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.82■□□□□ 0.92
Cd44P15379 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd44P15379 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd44P15379 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd44P15379 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd44P15379 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cd44P15379 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.81■□□□□ 0.92
Cd44P15379 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.81■□□□□ 0.92
Cd44P15379 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd44P15379 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cd44P15379 Golph3-205ENSMUST00000228671 2842 ntBASIC20.81■□□□□ 0.92
Cd44P15379 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd44P15379 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cd44P15379 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
Cd44P15379 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.8■□□□□ 0.92
Cd44P15379 Mir6236-201ENSMUST00000184437 123 ntBASIC20.8■□□□□ 0.92
Cd44P15379 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cd44P15379 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd44P15379 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd44P15379 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cd44P15379 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cd44P15379 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd44P15379 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd44P15379 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd44P15379 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cd44P15379 Gm43530-201ENSMUST00000195920 274 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms