Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 CDC8YJR057W 651 nt5.43□□□□□ -1.54
TY2B-LR1P0C2J3 ARC15YIL062C 465 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 DER1YBR201W 636 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 SYT1YPR095C 3681 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 VMS1YDR049W 1899 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 APC1YNL172W 5247 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 MCX1YBR227C 1563 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 APE2YKL157W 2859 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 TAF8YML114C 1533 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 YGR107WYGR107W 450 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 DAM1YGR113W 1032 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 YHR212W-AYHR212W-A 204 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 USB1YLR132C 873 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 YAR061WYAR061W 204 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 MDY2YOL111C 639 nt5.42□□□□□ -1.54
TY2B-LR1P0C2J3 PRP19YLL036C 1512 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 NGL2YMR285C 1548 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 ECM21YBL101C 3354 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 MNN11YJL183W 1269 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 VTA1YLR181C 993 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 PSF3YOL146W 585 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 THI7YLR237W 1797 nt5.41□□□□□ -1.54
TY2B-LR1P0C2J3 MSR1YHR091C 1932 nt5.4□□□□□ -1.54
TY2B-LR1P0C2J3 MBB1YJL199C 327 nt5.4□□□□□ -1.54
TY2B-LR1P0C2J3 YOR073W-AYOR073W-A 234 nt5.4□□□□□ -1.54
TY2B-LR1P0C2J3 SRB6YBR253W 366 nt5.4□□□□□ -1.54
TY2B-LR1P0C2J3 RIM9YMR063W 720 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 ATG8YBL078C 354 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 BMH1YER177W 804 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 RIM11YMR139W 1113 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 EXO1YOR033C 2109 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 FAS2YPL231W 5664 nt5.39□□□□□ -1.55
TY2B-LR1P0C2J3 HGH1YGR187C 1185 nt5.38□□□□□ -1.55
TY2B-LR1P0C2J3 TRM1YDR120C 1713 nt5.37□□□□□ -1.55
TY2B-LR1P0C2J3 PPX1YHR201C 1194 nt5.37□□□□□ -1.55
TY2B-LR1P0C2J3 PRE9YGR135W 777 nt5.37□□□□□ -1.55
TY2B-LR1P0C2J3 COX23YHR116W 456 nt5.37□□□□□ -1.55
TY2B-LR1P0C2J3 snR32snR32 188 nt5.37□□□□□ -1.55
TY2B-LR1P0C2J3 BOI2YER114C 3123 nt5.36□□□□□ -1.55
TY2B-LR1P0C2J3 YDR444WYDR444W 2064 nt5.36□□□□□ -1.55
TY2B-LR1P0C2J3 YGR051CYGR051C 324 nt5.36□□□□□ -1.55
TY2B-LR1P0C2J3 HSP82YPL240C 2130 nt5.35□□□□□ -1.55
TY2B-LR1P0C2J3 APC9YLR102C 798 nt5.35□□□□□ -1.55
TY2B-LR1P0C2J3 YBL059WYBL059W 582 nt5.35□□□□□ -1.55
TY2B-LR1P0C2J3 EMP70YLR083C 2004 nt5.35□□□□□ -1.55
TY2B-LR1P0C2J3 BNA5YLR231C 1362 nt5.35□□□□□ -1.55
TY2B-LR1P0C2J3 SHE1YBL031W 1017 nt5.34□□□□□ -1.55
TY2B-LR1P0C2J3 FSH3YOR280C 801 nt5.34□□□□□ -1.55
TY2B-LR1P0C2J3 CHD1YER164W 4407 nt5.34□□□□□ -1.55
TY2B-LR1P0C2J3 TOS3YGL179C 1683 nt5.33□□□□□ -1.56
TY2B-LR1P0C2J3 YBR137WYBR137W 540 nt5.33□□□□□ -1.56
TY2B-LR1P0C2J3 HOM3YER052C 1584 nt5.33□□□□□ -1.56
TY2B-LR1P0C2J3 CKA2YOR061W 1020 nt5.32□□□□□ -1.56
TY2B-LR1P0C2J3 YPL114WYPL114W 420 nt5.32□□□□□ -1.56
TY2B-LR1P0C2J3 RPL8AYHL033C 771 nt5.32□□□□□ -1.56
TY2B-LR1P0C2J3 RTT109YLL002W 1311 nt5.32□□□□□ -1.56
TY2B-LR1P0C2J3 YML020WYML020W 1995 nt5.31□□□□□ -1.56
TY2B-LR1P0C2J3 ECM16YMR128W 3804 nt5.31□□□□□ -1.56
TY2B-LR1P0C2J3 RIM15YFL033C 5313 nt5.31□□□□□ -1.56
TY2B-LR1P0C2J3 EKI1YDR147W 1605 nt5.31□□□□□ -1.56
TY2B-LR1P0C2J3 PEX7YDR142C 1128 nt5.31□□□□□ -1.56
TY2B-LR1P0C2J3 SAS10YDL153C 1833 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 AVT1YJR001W 1809 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 PAM1YDR251W 2493 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 MRH1YDR033W 963 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 tF(GAA)DtF(GAA)D 73 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 tF(GAA)NtF(GAA)N 73 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 YJR128WYJR128W 360 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 STP22YCL008C 1158 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 DRS2YAL026C 4068 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 MET10YFR030W 3108 nt5.3□□□□□ -1.56
TY2B-LR1P0C2J3 NOP7YGR103W 1818 nt5.29□□□□□ -1.56
TY2B-LR1P0C2J3 YER034WYER034W 558 nt5.29□□□□□ -1.56
TY2B-LR1P0C2J3 COA4YLR218C 453 nt5.29□□□□□ -1.56
TY2B-LR1P0C2J3 EXO5YBR163W 1758 nt5.29□□□□□ -1.56
TY2B-LR1P0C2J3 COS8YHL048W 1146 nt5.29□□□□□ -1.56
TY2B-LR1P0C2J3 TED1YIL039W 1422 nt5.28□□□□□ -1.56
TY2B-LR1P0C2J3 MCK1YNL307C 1128 nt5.28□□□□□ -1.56
TY2B-LR1P0C2J3 NIP7YPL211W 546 nt5.28□□□□□ -1.56
TY2B-LR1P0C2J3 OMS1YDR316W 1416 nt5.28□□□□□ -1.56
TY2B-LR1P0C2J3 HOM2YDR158W 1098 nt5.27□□□□□ -1.57
TY2B-LR1P0C2J3 MAK16YAL025C 921 nt5.27□□□□□ -1.57
TY2B-LR1P0C2J3 MRPL16YBL038W 699 nt5.27□□□□□ -1.57
TY2B-LR1P0C2J3 YJL175WYJL175W 513 nt5.27□□□□□ -1.57
TY2B-LR1P0C2J3 RPS9BYBR189W 588 nt5.27□□□□□ -1.57
TY2B-LR1P0C2J3 IME4YGL192W 1803 nt5.26□□□□□ -1.57
TY2B-LR1P0C2J3 YFL052WYFL052W 1398 nt5.26□□□□□ -1.57
TY2B-LR1P0C2J3 YTA6YPL074W 2265 nt5.26□□□□□ -1.57
TY2B-LR1P0C2J3 TEM1YML064C 738 nt5.26□□□□□ -1.57
TY2B-LR1P0C2J3 MIS1YBR084W 2928 nt5.26□□□□□ -1.57
TY2B-LR1P0C2J3 RAI1YGL246C 1164 nt5.25□□□□□ -1.57
TY2B-LR1P0C2J3 RAD53YPL153C 2466 nt5.25□□□□□ -1.57
TY2B-LR1P0C2J3 LEU1YGL009C 2340 nt5.24□□□□□ -1.57
TY2B-LR1P0C2J3 ARG5,6YER069W 2592 nt5.24□□□□□ -1.57
TY2B-LR1P0C2J3 UBA2YDR390C 1911 nt5.24□□□□□ -1.57
TY2B-LR1P0C2J3 HSP42YDR171W 1128 nt5.23□□□□□ -1.57
TY2B-LR1P0C2J3 UPS3YDR185C 540 nt5.23□□□□□ -1.57
TY2B-LR1P0C2J3 COX14YML129C 213 nt5.23□□□□□ -1.57
TY2B-LR1P0C2J3 PAN5YHR063C 1140 nt5.22□□□□□ -1.57
TY2B-LR1P0C2J3 ECM32YER176W 3366 nt5.22□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms