Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQB2P05538 SRD5A1P1-201ENST00000442297 786 ntBASIC22.61■■□□□ 1.21
HLA-DQB2P05538 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.61■■□□□ 1.21
HLA-DQB2P05538 AC009086.3-201ENST00000623486 1008 ntBASIC22.61■■□□□ 1.21
HLA-DQB2P05538 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HLA-DQB2P05538 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 AC241377.3-202ENST00000626088 1088 ntBASIC22.6■■□□□ 1.21
HLA-DQB2P05538 AC241585.3-202ENST00000628937 1088 ntBASIC22.6■■□□□ 1.21
HLA-DQB2P05538 AC245100.8-202ENST00000629247 1058 ntBASIC22.6■■□□□ 1.21
HLA-DQB2P05538 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HLA-DQB2P05538 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.59■■□□□ 1.21
HLA-DQB2P05538 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.58■■□□□ 1.21
HLA-DQB2P05538 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
HLA-DQB2P05538 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.58■■□□□ 1.2
HLA-DQB2P05538 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
HLA-DQB2P05538 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.58■■□□□ 1.2
HLA-DQB2P05538 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.58■■□□□ 1.2
HLA-DQB2P05538 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.58■■□□□ 1.2
HLA-DQB2P05538 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 C1orf229-201ENST00000623686 2258 ntBASIC22.57■■□□□ 1.2
HLA-DQB2P05538 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HLA-DQB2P05538 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 AL136116.3-201ENST00000402907 1138 ntBASIC22.56■■□□□ 1.2
HLA-DQB2P05538 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
HLA-DQB2P05538 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HLA-DQB2P05538 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 AL499627.2-201ENST00000606283 725 ntBASIC22.54■■□□□ 1.2
HLA-DQB2P05538 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HLA-DQB2P05538 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 pRNA.6-201ENST00000610482 90 ntBASIC22.53■■□□□ 1.2
HLA-DQB2P05538 pRNA.5-201ENST00000612139 90 ntBASIC22.53■■□□□ 1.2
HLA-DQB2P05538 pRNA.11-201ENST00000618423 90 ntBASIC22.53■■□□□ 1.2
HLA-DQB2P05538 pRNA.13-201ENST00000619112 90 ntBASIC22.53■■□□□ 1.2
HLA-DQB2P05538 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DQB2P05538 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.52■■□□□ 1.2
HLA-DQB2P05538 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DQB2P05538 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.52■■□□□ 1.2
HLA-DQB2P05538 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms