Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TOMM40O96008 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.34■□□□□ 0.37
TOMM40O96008 AL353803.4-201ENST00000565882 1934 ntBASIC17.34■□□□□ 0.37
TOMM40O96008 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TOMM40O96008 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.34■□□□□ 0.37
TOMM40O96008 GUSBP5-202ENST00000510805 1989 ntBASIC17.33■□□□□ 0.37
TOMM40O96008 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOMM40O96008 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOMM40O96008 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOMM40O96008 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOMM40O96008 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.33■□□□□ 0.36
TOMM40O96008 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.33■□□□□ 0.36
TOMM40O96008 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOMM40O96008 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOMM40O96008 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TOMM40O96008 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.32■□□□□ 0.36
TOMM40O96008 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.32■□□□□ 0.36
TOMM40O96008 AL031848.2-201ENST00000607670 837 ntBASIC17.32■□□□□ 0.36
TOMM40O96008 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.32■□□□□ 0.36
TOMM40O96008 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.32■□□□□ 0.36
TOMM40O96008 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOMM40O96008 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.32■□□□□ 0.36
TOMM40O96008 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.32■□□□□ 0.36
TOMM40O96008 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.32■□□□□ 0.36
TOMM40O96008 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TOMM40O96008 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.31■□□□□ 0.36
TOMM40O96008 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.31■□□□□ 0.36
TOMM40O96008 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.31■□□□□ 0.36
TOMM40O96008 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.31■□□□□ 0.36
TOMM40O96008 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.31■□□□□ 0.36
TOMM40O96008 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.31■□□□□ 0.36
TOMM40O96008 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.31■□□□□ 0.36
TOMM40O96008 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.31■□□□□ 0.36
TOMM40O96008 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOMM40O96008 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.3■□□□□ 0.36
TOMM40O96008 ECEL1P1-201ENST00000373592 1742 ntBASIC17.3■□□□□ 0.36
TOMM40O96008 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TOMM40O96008 AC144652.1-201ENST00000609974 1624 ntBASIC17.3■□□□□ 0.36
TOMM40O96008 AC137767.1-201ENST00000602918 1920 ntBASIC17.3■□□□□ 0.36
TOMM40O96008 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.3■□□□□ 0.36
TOMM40O96008 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.3■□□□□ 0.36
TOMM40O96008 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TOMM40O96008 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.3■□□□□ 0.36
TOMM40O96008 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.3■□□□□ 0.36
TOMM40O96008 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TOMM40O96008 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.3■□□□□ 0.36
TOMM40O96008 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TOMM40O96008 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOMM40O96008 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TOMM40O96008 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.29■□□□□ 0.36
TOMM40O96008 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.29■□□□□ 0.36
TOMM40O96008 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.29■□□□□ 0.36
TOMM40O96008 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
TOMM40O96008 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOMM40O96008 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
TOMM40O96008 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOMM40O96008 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms