Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
ATP2A1O14983 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP2A1O14983 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP2A1O14983 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP2A1O14983 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP2A1O14983 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.59■■□□□ 1.69
ATP2A1O14983 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP2A1O14983 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ATP2A1O14983 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ATP2A1O14983 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.58■■□□□ 1.69
ATP2A1O14983 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP2A1O14983 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.58■■□□□ 1.69
ATP2A1O14983 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.58■■□□□ 1.69
ATP2A1O14983 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.58■■□□□ 1.69
ATP2A1O14983 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ATP2A1O14983 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP2A1O14983 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP2A1O14983 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.57■■□□□ 1.68
ATP2A1O14983 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
ATP2A1O14983 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP2A1O14983 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.57■■□□□ 1.68
ATP2A1O14983 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.56■■□□□ 1.68
ATP2A1O14983 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP2A1O14983 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP2A1O14983 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.56■■□□□ 1.68
ATP2A1O14983 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP2A1O14983 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ATP2A1O14983 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.56■■□□□ 1.68
ATP2A1O14983 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.56■■□□□ 1.68
ATP2A1O14983 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ATP2A1O14983 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.55■■□□□ 1.68
ATP2A1O14983 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.55■■□□□ 1.68
ATP2A1O14983 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.55■■□□□ 1.68
ATP2A1O14983 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.55■■□□□ 1.68
ATP2A1O14983 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
ATP2A1O14983 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
ATP2A1O14983 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ATP2A1O14983 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.55■■□□□ 1.68
ATP2A1O14983 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L2-201ENST00000561772 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L6-201ENST00000626483 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L1-201ENST00000627662 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L8-201ENST00000629013 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L3-201ENST00000630187 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L7-201ENST00000630678 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 DUX4L5-201ENST00000630834 1275 ntBASIC25.55■■□□□ 1.68
ATP2A1O14983 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP2A1O14983 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
ATP2A1O14983 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
ATP2A1O14983 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.54■■□□□ 1.68
ATP2A1O14983 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.54■■□□□ 1.68
ATP2A1O14983 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.54■■□□□ 1.68
ATP2A1O14983 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 LINC01124-201ENST00000409786 2117 ntBASIC25.54■■□□□ 1.68
ATP2A1O14983 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP2A1O14983 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP2A1O14983 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP2A1O14983 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP2A1O14983 MIR6084-201ENST00000622012 110 ntBASIC25.53■■□□□ 1.68
ATP2A1O14983 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.53■■□□□ 1.68
ATP2A1O14983 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.53■■□□□ 1.68
ATP2A1O14983 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP2A1O14983 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP2A1O14983 AL139125.2-201ENST00000623134 1869 ntBASIC25.52■■□□□ 1.68
ATP2A1O14983 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ATP2A1O14983 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.52■■□□□ 1.68
ATP2A1O14983 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.52■■□□□ 1.68
ATP2A1O14983 KRT18P5-201ENST00000436075 1291 ntBASIC25.52■■□□□ 1.68
ATP2A1O14983 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ATP2A1O14983 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ATP2A1O14983 AC004812.2-201ENST00000611079 2094 ntBASIC25.52■■□□□ 1.68
ATP2A1O14983 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ATP2A1O14983 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATP2A1O14983 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms