Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 KRT18P33-201ENST00000398525 1043 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN6P56747 AL954722.1-201ENST00000431238 259 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 YY1P2-201ENST00000438766 948 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN6P56747 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN6P56747 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN6P56747 AC026412.1-206ENST00000502273 206 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN6P56747 AP003040.1-201ENST00000532044 1024 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 METTL7AP1-201ENST00000547343 496 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN6P56747 CDC37P2-201ENST00000562287 1029 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN6P56747 AC006986.1-201ENST00000612764 241 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN6P56747 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 PEG13-201ENST00000631594 5667 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 AC079781.5-202ENST00000641784 3743 ntBASIC13.04□□□□□ -0.32
CLDN6P56747 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN6P56747 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN6P56747 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN6P56747 AC073869.1-201ENST00000415574 2762 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CLDN6P56747 MIR339-201ENST00000362153 94 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 AL359092.2-201ENST00000423330 585 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN6P56747 NDUFB2P1-201ENST00000506966 295 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.03□□□□□ -0.32
CLDN6P56747 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 AL353622.2-201ENST00000605846 425 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 AL512324.3-201ENST00000619383 882 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 AC010327.5-201ENST00000586923 3061 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 RCC2P1-201ENST00000452257 1476 ntBASIC13.03□□□□□ -0.32
CLDN6P56747 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN6P56747 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLDN6P56747 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN6P56747 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN6P56747 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN6P56747 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN6P56747 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN6P56747 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms