Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOBEC1P41238 Z82244.1-201ENST00000631502 840 ntBASIC12.33□□□□□ -0.44
APOBEC1P41238 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 AC092115.1-201ENST00000566277 1402 ntBASIC12.33□□□□□ -0.44
APOBEC1P41238 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
APOBEC1P41238 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOBEC1P41238 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.33□□□□□ -0.44
APOBEC1P41238 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AC103563.1-201ENST00000429316 123 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.32□□□□□ -0.44
APOBEC1P41238 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 PIGCP1-201ENST00000527583 895 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.32□□□□□ -0.44
APOBEC1P41238 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.32□□□□□ -0.44
APOBEC1P41238 RPL17P45-201ENST00000586289 509 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 AC092171.5-201ENST00000608012 942 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 AC107464.3-201ENST00000609172 737 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 AL591926.3-201ENST00000611630 238 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.32□□□□□ -0.44
APOBEC1P41238 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
APOBEC1P41238 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 DLX4-206ENST00000611342 1662 ntBASIC12.32□□□□□ -0.44
APOBEC1P41238 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOBEC1P41238 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
APOBEC1P41238 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.31□□□□□ -0.44
APOBEC1P41238 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
APOBEC1P41238 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
APOBEC1P41238 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.31□□□□□ -0.44
APOBEC1P41238 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 AC007336.3-201ENST00000623886 2160 ntBASIC12.31□□□□□ -0.44
APOBEC1P41238 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOBEC1P41238 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
APOBEC1P41238 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms