Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ZIC3O60481 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 CFL1P6-201ENST00000400899 494 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.26□□□□□ -0.45
ZIC3O60481 AQP7P5-201ENST00000428759 1049 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 ASS1P2-201ENST00000439895 1223 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 AQP7P4-201ENST00000447083 1042 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.26□□□□□ -0.45
ZIC3O60481 AQP7P2-201ENST00000453967 1041 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 RN7SL396P-201ENST00000471086 295 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.26□□□□□ -0.45
ZIC3O60481 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.26□□□□□ -0.45
ZIC3O60481 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.26□□□□□ -0.45
ZIC3O60481 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 GOLGA2P7-209ENST00000560408 745 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ZIC3O60481 AC006158.1-201ENST00000610661 249 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 MIR6727-201ENST00000620702 65 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 AQP7P3-201ENST00000624547 1041 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.26□□□□□ -0.45
ZIC3O60481 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ZIC3O60481 AL672207.1-201ENST00000328462 1570 ntBASIC12.26□□□□□ -0.45
ZIC3O60481 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.26□□□□□ -0.45
ZIC3O60481 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.26□□□□□ -0.45
ZIC3O60481 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZIC3O60481 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 AC073862.5-201ENST00000624129 2027 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 AC131212.3-201ENST00000624087 4219 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 MEX3B-202ENST00000558133 4333 ntBASIC12.25□□□□□ -0.45
ZIC3O60481 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.25□□□□□ -0.45
ZIC3O60481 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ZIC3O60481 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ZIC3O60481 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ZIC3O60481 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.25□□□□□ -0.45
ZIC3O60481 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms