Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AL008707.1-201ENST00000422498 534 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RN7SL11P-201ENST00000471305 293 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AL137779.3-201ENST00000553295 729 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AL606495.2-201ENST00000605867 535 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AC091807.1-201ENST00000418838 1544 ntBASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.55□□□□□ -0.4
RSPO3Q9BXY4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 SSR4P1-201ENST00000415143 412 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC005077.2-201ENST00000449786 690 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AP000358.1-201ENST00000456260 156 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 RTN3P1-201ENST00000536295 711 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AL132994.1-201ENST00000554098 400 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC012073.1-201ENST00000606114 1108 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC244452.3-201ENST00000636814 210 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC005154.3-201ENST00000419639 1393 ntBASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RSPO3Q9BXY4 AC139491.6-202ENST00000637171 2077 ntBASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RSPO3Q9BXY4 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms