Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 AC135731.1-201ENST00000569415 2548 ntBASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
SCN10AQ9Y5Y9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 AC144652.1-201ENST00000609974 1624 ntBASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 AP005435.1-201ENST00000529293 1178 ntBASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 DUX4L4-201ENST00000566884 1269 ntBASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCN10AQ9Y5Y9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SCN10AQ9Y5Y9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SCN10AQ9Y5Y9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCN10AQ9Y5Y9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
SCN10AQ9Y5Y9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.79■■□□□ 1.56
SCN10AQ9Y5Y9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.78■■□□□ 1.56
SCN10AQ9Y5Y9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SCN10AQ9Y5Y9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 AC004911.1-201ENST00000416316 871 ntBASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SCN10AQ9Y5Y9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 KRT18P61-201ENST00000585825 1298 ntBASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 TPRG1LP1-201ENST00000598702 760 ntBASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.75■■□□□ 1.55
SCN10AQ9Y5Y9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.74■■□□□ 1.55
SCN10AQ9Y5Y9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SCN10AQ9Y5Y9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms