Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TLR9Q9NR96 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TLR9Q9NR96 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.85■■□□□ 1.41
TLR9Q9NR96 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.85■■□□□ 1.41
TLR9Q9NR96 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TLR9Q9NR96 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TLR9Q9NR96 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TLR9Q9NR96 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TLR9Q9NR96 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.85■■□□□ 1.41
TLR9Q9NR96 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.84■■□□□ 1.41
TLR9Q9NR96 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.84■■□□□ 1.41
TLR9Q9NR96 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.84■■□□□ 1.41
TLR9Q9NR96 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TLR9Q9NR96 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR9Q9NR96 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TLR9Q9NR96 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TLR9Q9NR96 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.83■■□□□ 1.41
TLR9Q9NR96 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TLR9Q9NR96 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
TLR9Q9NR96 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TLR9Q9NR96 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TLR9Q9NR96 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.82■■□□□ 1.4
TLR9Q9NR96 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.82■■□□□ 1.4
TLR9Q9NR96 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.82■■□□□ 1.4
TLR9Q9NR96 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TLR9Q9NR96 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TLR9Q9NR96 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TLR9Q9NR96 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
TLR9Q9NR96 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.81■■□□□ 1.4
TLR9Q9NR96 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TLR9Q9NR96 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TLR9Q9NR96 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TLR9Q9NR96 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.81■■□□□ 1.4
TLR9Q9NR96 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TLR9Q9NR96 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 FP325331.1-202ENST00000623531 1380 ntBASIC23.8■■□□□ 1.4
TLR9Q9NR96 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.8■■□□□ 1.4
TLR9Q9NR96 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR9Q9NR96 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TLR9Q9NR96 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TLR9Q9NR96 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.79■■□□□ 1.4
TLR9Q9NR96 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR9Q9NR96 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.79■■□□□ 1.4
TLR9Q9NR96 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.79■■□□□ 1.4
TLR9Q9NR96 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR9Q9NR96 AP005435.1-201ENST00000529293 1178 ntBASIC23.79■■□□□ 1.4
TLR9Q9NR96 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.79■■□□□ 1.4
TLR9Q9NR96 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.78■■□□□ 1.4
TLR9Q9NR96 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.78■■□□□ 1.4
TLR9Q9NR96 DUX4L4-201ENST00000566884 1269 ntBASIC23.78■■□□□ 1.4
TLR9Q9NR96 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR9Q9NR96 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.78■■□□□ 1.4
TLR9Q9NR96 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TLR9Q9NR96 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TLR9Q9NR96 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.77■■□□□ 1.4
TLR9Q9NR96 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TLR9Q9NR96 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TLR9Q9NR96 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TLR9Q9NR96 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TLR9Q9NR96 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.77■■□□□ 1.4
TLR9Q9NR96 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
TLR9Q9NR96 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TLR9Q9NR96 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.76■■□□□ 1.39
TLR9Q9NR96 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TLR9Q9NR96 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.76■■□□□ 1.39
TLR9Q9NR96 AC105233.4-201ENST00000642045 216 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms