Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Raet1eQ9CZQ6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Raet1eQ9CZQ6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Raet1eQ9CZQ6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Raet1eQ9CZQ6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.47■□□□□ 0.39
Raet1eQ9CZQ6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.46■□□□□ 0.39
Raet1eQ9CZQ6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1eQ9CZQ6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1eQ9CZQ6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1eQ9CZQ6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Raet1eQ9CZQ6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Raet1eQ9CZQ6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Raet1eQ9CZQ6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Raet1eQ9CZQ6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Raet1eQ9CZQ6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Raet1eQ9CZQ6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms