Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC004911.1-201ENST00000416316 871 ntBASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 IGHV3-19-201ENST00000521488 291 ntBASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 LINC01124-201ENST00000409786 2117 ntBASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC46A1Q96NT5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 LINC00543-201ENST00000567234 1845 ntBASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 AC135731.1-201ENST00000569415 2548 ntBASIC21.42■■□□□ 1.02
SLC46A1Q96NT5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 AL354811.1-201ENST00000610286 706 ntBASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC46A1Q96NT5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC46A1Q96NT5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC46A1Q96NT5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC46A1Q96NT5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 ID1-201ENST00000376105 1233 ntBASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 AC012414.1-201ENST00000556676 535 ntBASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 MIR6084-201ENST00000622012 110 ntBASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC46A1Q96NT5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 CCDC92B-201ENST00000575506 885 ntBASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC46A1Q96NT5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC46A1Q96NT5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 NTF6G-201ENST00000591094 616 ntBASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC46A1Q96NT5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 ALDH1A3-203ENST00000557963 1670 ntBASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms