Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APH1BQ8WW43 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.24■□□□□ 0.83
APH1BQ8WW43 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APH1BQ8WW43 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APH1BQ8WW43 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
APH1BQ8WW43 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
APH1BQ8WW43 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
APH1BQ8WW43 AC087742.1-201ENST00000575880 1738 ntBASIC20.22■□□□□ 0.83
APH1BQ8WW43 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 AL353803.4-201ENST00000565882 1934 ntBASIC20.22■□□□□ 0.83
APH1BQ8WW43 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
APH1BQ8WW43 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.22■□□□□ 0.83
APH1BQ8WW43 AC087393.1-201ENST00000582896 145 ntBASIC20.22■□□□□ 0.83
APH1BQ8WW43 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
APH1BQ8WW43 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
APH1BQ8WW43 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
APH1BQ8WW43 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.21■□□□□ 0.83
APH1BQ8WW43 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.21■□□□□ 0.83
APH1BQ8WW43 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
APH1BQ8WW43 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.21■□□□□ 0.83
APH1BQ8WW43 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
APH1BQ8WW43 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
APH1BQ8WW43 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.2■□□□□ 0.82
APH1BQ8WW43 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.2■□□□□ 0.82
APH1BQ8WW43 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.2■□□□□ 0.82
APH1BQ8WW43 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APH1BQ8WW43 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
APH1BQ8WW43 AC133552.2-201ENST00000619106 1032 ntBASIC20.2■□□□□ 0.82
APH1BQ8WW43 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
APH1BQ8WW43 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
APH1BQ8WW43 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
APH1BQ8WW43 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
APH1BQ8WW43 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.19■□□□□ 0.82
APH1BQ8WW43 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 SPCS2P3-201ENST00000500401 656 ntBASIC20.19■□□□□ 0.82
APH1BQ8WW43 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.19■□□□□ 0.82
APH1BQ8WW43 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.19■□□□□ 0.82
APH1BQ8WW43 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
APH1BQ8WW43 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APH1BQ8WW43 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1BQ8WW43 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APH1BQ8WW43 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1BQ8WW43 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1BQ8WW43 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1BQ8WW43 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
APH1BQ8WW43 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
APH1BQ8WW43 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.18■□□□□ 0.82
APH1BQ8WW43 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APH1BQ8WW43 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1BQ8WW43 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
APH1BQ8WW43 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APH1BQ8WW43 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APH1BQ8WW43 MIR639-201ENST00000384974 98 ntBASIC20.16■□□□□ 0.82
APH1BQ8WW43 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
APH1BQ8WW43 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APH1BQ8WW43 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APH1BQ8WW43 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.16■□□□□ 0.82
APH1BQ8WW43 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
APH1BQ8WW43 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
APH1BQ8WW43 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.16■□□□□ 0.82
APH1BQ8WW43 FAM99A-202ENST00000538190 1989 ntBASIC20.15■□□□□ 0.82
APH1BQ8WW43 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
APH1BQ8WW43 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
APH1BQ8WW43 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms