Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLRC3Q7RTR2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLRC3Q7RTR2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 MIR6089-201ENST00000616698 64 ntBASIC19.38■□□□□ 0.69
NLRC3Q7RTR2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NLRC3Q7RTR2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 TSPY9P-201ENST00000440215 945 ntBASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 TSPY11P-201ENST00000442607 1045 ntBASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 AC092028.1-203ENST00000608262 953 ntBASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NLRC3Q7RTR2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
NLRC3Q7RTR2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 AF131216.4-201ENST00000638924 1588 ntBASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.34■□□□□ 0.69
NLRC3Q7RTR2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NLRC3Q7RTR2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NLRC3Q7RTR2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NLRC3Q7RTR2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NLRC3Q7RTR2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NLRC3Q7RTR2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NLRC3Q7RTR2 KRT16P3-201ENST00000439127 1283 ntBASIC19.33■□□□□ 0.68
NLRC3Q7RTR2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.33■□□□□ 0.68
NLRC3Q7RTR2 MTDHP2-201ENST00000601468 714 ntBASIC19.33■□□□□ 0.68
NLRC3Q7RTR2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.33■□□□□ 0.68
NLRC3Q7RTR2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms