Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 PRD1YCL057W 2139 nt3.86□□□□□ -1.79
CDC40P40968 TOS4YLR183C 1470 nt3.86□□□□□ -1.79
CDC40P40968 ALO1YML086C 1581 nt3.86□□□□□ -1.79
CDC40P40968 COX4YGL187C 468 nt3.86□□□□□ -1.79
CDC40P40968 RPB4YJL140W 666 nt3.86□□□□□ -1.79
CDC40P40968 ARC40YBR234C 1155 nt3.86□□□□□ -1.79
CDC40P40968 POP4YBR257W 840 nt3.86□□□□□ -1.79
CDC40P40968 GAL10YBR019C 2100 nt3.86□□□□□ -1.79
CDC40P40968 MLF3YNL074C 1359 nt3.86□□□□□ -1.79
CDC40P40968 SKG6YHR149C 2205 nt3.86□□□□□ -1.79
CDC40P40968 PRR2YDL214C 2100 nt3.85□□□□□ -1.79
CDC40P40968 YOL153CYOL153C 1746 nt3.85□□□□□ -1.79
CDC40P40968 RPP1AYDL081C 321 nt3.85□□□□□ -1.79
CDC40P40968 THI5YFL058W 1023 nt3.85□□□□□ -1.79
CDC40P40968 DCD1YHR144C 939 nt3.85□□□□□ -1.79
CDC40P40968 YIL014C-AYIL014C-A 315 nt3.85□□□□□ -1.79
CDC40P40968 MRP17YKL003C 396 nt3.85□□□□□ -1.79
CDC40P40968 MAP1YLR244C 1164 nt3.85□□□□□ -1.79
CDC40P40968 CPR3YML078W 549 nt3.85□□□□□ -1.79
CDC40P40968 THI12YNL332W 1023 nt3.85□□□□□ -1.79
CDC40P40968 HMT1YBR034C 1047 nt3.85□□□□□ -1.79
CDC40P40968 ISR1YPR106W 1332 nt3.85□□□□□ -1.79
CDC40P40968 RCM1YNL022C 1473 nt3.85□□□□□ -1.79
CDC40P40968 GCD1YOR260W 1737 nt3.84□□□□□ -1.79
CDC40P40968 RNA14YMR061W 2034 nt3.84□□□□□ -1.79
CDC40P40968 IWR1YDL115C 1062 nt3.84□□□□□ -1.79
CDC40P40968 RPB7YDR404C 516 nt3.84□□□□□ -1.79
CDC40P40968 YGR153WYGR153W 654 nt3.84□□□□□ -1.79
CDC40P40968 RPL8AYHL033C 771 nt3.84□□□□□ -1.79
CDC40P40968 YKL071WYKL071W 771 nt3.84□□□□□ -1.79
CDC40P40968 WRS1YOL097C 1299 nt3.84□□□□□ -1.79
CDC40P40968 RTT106YNL206C 1368 nt3.84□□□□□ -1.79
CDC40P40968 GLO3YER122C 1482 nt3.84□□□□□ -1.8
CDC40P40968 HOS3YPL116W 2094 nt3.83□□□□□ -1.8
CDC40P40968 YFL041W-AYFL041W-A 192 nt3.83□□□□□ -1.8
CDC40P40968 YGL088WYGL088W 366 nt3.83□□□□□ -1.8
CDC40P40968 YGL199CYGL199C 471 nt3.83□□□□□ -1.8
CDC40P40968 BGL2YGR282C 942 nt3.83□□□□□ -1.8
CDC40P40968 DAL3YIR032C 588 nt3.83□□□□□ -1.8
CDC40P40968 DBR1YKL149C 1218 nt3.83□□□□□ -1.8
CDC40P40968 DCN1YLR128W 810 nt3.83□□□□□ -1.8
CDC40P40968 GPI12YMR281W 915 nt3.83□□□□□ -1.8
CDC40P40968 YPT53YNL093W 663 nt3.83□□□□□ -1.8
CDC40P40968 LTO1YNL260C 597 nt3.83□□□□□ -1.8
CDC40P40968 AIM41YOR215C 558 nt3.83□□□□□ -1.8
CDC40P40968 DSE3YOR264W 1293 nt3.83□□□□□ -1.8
CDC40P40968 CUS1YMR240C 1311 nt3.83□□□□□ -1.8
CDC40P40968 RVB1YDR190C 1392 nt3.83□□□□□ -1.8
CDC40P40968 MPC54YOR177C 1395 nt3.83□□□□□ -1.8
CDC40P40968 APP1YNL094W 1764 nt3.83□□□□□ -1.8
CDC40P40968 BUD5YCR038C 1929 nt3.83□□□□□ -1.8
CDC40P40968 MCD4YKL165C 2760 nt3.83□□□□□ -1.8
CDC40P40968 APC1YNL172W 5247 nt3.83□□□□□ -1.8
CDC40P40968 RSC3YDR303C 2658 nt3.82□□□□□ -1.8
CDC40P40968 MIF2YKL089W 1650 nt3.82□□□□□ -1.8
CDC40P40968 BUD30YDL151C 582 nt3.82□□□□□ -1.8
CDC40P40968 NOP6YDL213C 678 nt3.82□□□□□ -1.8
CDC40P40968 DIN7YDR263C 1293 nt3.82□□□□□ -1.8
CDC40P40968 AIM22YJL046W 1230 nt3.82□□□□□ -1.8
CDC40P40968 SYN8YAL014C 768 nt3.82□□□□□ -1.8
CDC40P40968 TTI2YJR136C 1266 nt3.82□□□□□ -1.8
CDC40P40968 DCS1YLR270W 1053 nt3.82□□□□□ -1.8
CDC40P40968 TOM7YNL070W 183 nt3.82□□□□□ -1.8
CDC40P40968 MPD1YOR288C 957 nt3.82□□□□□ -1.8
CDC40P40968 MAK3YPR051W 531 nt3.82□□□□□ -1.8
CDC40P40968 CNS1YBR155W 1158 nt3.82□□□□□ -1.8
CDC40P40968 SPT16YGL207W 3108 nt3.81□□□□□ -1.8
CDC40P40968 MDM38YOL027C 1722 nt3.81□□□□□ -1.8
CDC40P40968 ROK1YGL171W 1695 nt3.81□□□□□ -1.8
CDC40P40968 RAD54YGL163C 2697 nt3.81□□□□□ -1.8
CDC40P40968 NUG1YER006W 1563 nt3.81□□□□□ -1.8
CDC40P40968 YGL188CYGL188C 174 nt3.81□□□□□ -1.8
CDC40P40968 SPC3YLR066W 555 nt3.81□□□□□ -1.8
CDC40P40968 EMG1YLR186W 759 nt3.81□□□□□ -1.8
CDC40P40968 CTR86YCR054C 1692 nt3.81□□□□□ -1.8
CDC40P40968 SPS2YDR522C 1509 nt3.8□□□□□ -1.8
CDC40P40968 TAF8YML114C 1533 nt3.8□□□□□ -1.8
CDC40P40968 RTK1YDL025C 1863 nt3.8□□□□□ -1.8
CDC40P40968 VAC17YCL063W 1272 nt3.8□□□□□ -1.8
CDC40P40968 YCR101CYCR101C 549 nt3.8□□□□□ -1.8
CDC40P40968 NUS1YDL193W 1128 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)CtK(CUU)C 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)D1tK(CUU)D1 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)D2tK(CUU)D2 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)E1tK(CUU)E1 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)E2tK(CUU)E2 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)FtK(CUU)F 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)G1tK(CUU)G1 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)G2tK(CUU)G2 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)G3tK(CUU)G3 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)ItK(CUU)I 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)JtK(CUU)J 73 nt3.8□□□□□ -1.8
CDC40P40968 YER147C-AYER147C-A 411 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)KtK(CUU)K 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)MtK(CUU)M 73 nt3.8□□□□□ -1.8
CDC40P40968 tK(CUU)PtK(CUU)P 73 nt3.8□□□□□ -1.8
CDC40P40968 YIL021C-AYIL021C-A 270 nt3.8□□□□□ -1.8
CDC40P40968 YJR012CYJR012C 624 nt3.8□□□□□ -1.8
CDC40P40968 TVP38YKR088C 1014 nt3.8□□□□□ -1.8
CDC40P40968 ISA1YLL027W 753 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms