Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 URA3YEL021W 804 nt6.12□□□□□ -1.43
MSH4P40965 UTR4YEL038W 684 nt6.12□□□□□ -1.43
MSH4P40965 CCE1YKL011C 1062 nt6.12□□□□□ -1.43
MSH4P40965 RRT1YBL048W 312 nt6.12□□□□□ -1.43
MSH4P40965 ZRC1YMR243C 1329 nt6.12□□□□□ -1.43
MSH4P40965 YBL068W-AYBL068W-A 237 nt6.12□□□□□ -1.43
MSH4P40965 EAF7YNL136W 1278 nt6.12□□□□□ -1.43
MSH4P40965 YBL077WYBL077W 432 nt6.12□□□□□ -1.43
MSH4P40965 YOR008W-BYOR008W-B 102 nt6.12□□□□□ -1.43
MSH4P40965 GLO4YOR040W 858 nt6.12□□□□□ -1.43
MSH4P40965 SAS5YOR213C 747 nt6.12□□□□□ -1.43
MSH4P40965 RMI1YPL024W 726 nt6.12□□□□□ -1.43
MSH4P40965 SAS10YDL153C 1833 nt6.11□□□□□ -1.43
MSH4P40965 UTP18YJL069C 1785 nt6.11□□□□□ -1.43
MSH4P40965 NRD1YNL251C 1728 nt6.11□□□□□ -1.43
MSH4P40965 COT1YOR316C 1320 nt6.11□□□□□ -1.43
MSH4P40965 DDI2YFL061W 678 nt6.11□□□□□ -1.43
MSH4P40965 YGR270C-AYGR270C-A 219 nt6.11□□□□□ -1.43
MSH4P40965 HOT13YKL084W 351 nt6.11□□□□□ -1.43
MSH4P40965 PDR16YNL231C 1056 nt6.11□□□□□ -1.43
MSH4P40965 DDI3YNL335W 678 nt6.11□□□□□ -1.43
MSH4P40965 PPG1YNR032W 1107 nt6.11□□□□□ -1.43
MSH4P40965 ATG14YBR128C 1035 nt6.11□□□□□ -1.43
MSH4P40965 SRB6YBR253W 366 nt6.11□□□□□ -1.43
MSH4P40965 GRX1YCL035C 333 nt6.11□□□□□ -1.43
MSH4P40965 ARB1YER036C 1833 nt6.11□□□□□ -1.43
MSH4P40965 YTA12YMR089C 2478 nt6.1□□□□□ -1.43
MSH4P40965 YEL077CYEL077C 3834 nt6.1□□□□□ -1.43
MSH4P40965 STB3YDR169C 1542 nt6.1□□□□□ -1.43
MSH4P40965 PRE1YER012W 597 nt6.1□□□□□ -1.43
MSH4P40965 PCT1YGR202C 1275 nt6.1□□□□□ -1.43
MSH4P40965 RPC17YJL011C 486 nt6.1□□□□□ -1.43
MSH4P40965 YLR374CYLR374C 390 nt6.1□□□□□ -1.43
MSH4P40965 RPS10BYMR230W 318 nt6.1□□□□□ -1.43
MSH4P40965 YBR063CYBR063C 1215 nt6.1□□□□□ -1.43
MSH4P40965 ARO4YBR249C 1113 nt6.1□□□□□ -1.43
MSH4P40965 EUG1YDR518W 1554 nt6.1□□□□□ -1.43
MSH4P40965 IMA1YGR287C 1770 nt6.09□□□□□ -1.43
MSH4P40965 TFC7YOR110W 1308 nt6.09□□□□□ -1.43
MSH4P40965 QRI7YDL104C 1224 nt6.09□□□□□ -1.43
MSH4P40965 GLE2YER107C 1098 nt6.09□□□□□ -1.43
MSH4P40965 GRX4YER174C 735 nt6.09□□□□□ -1.43
MSH4P40965 YIL060WYIL060W 435 nt6.09□□□□□ -1.43
MSH4P40965 YIL152WYIL152W 708 nt6.09□□□□□ -1.43
MSH4P40965 YJL068CYJL068C 900 nt6.09□□□□□ -1.43
MSH4P40965 SER1YOR184W 1188 nt6.09□□□□□ -1.43
MSH4P40965 MGE1YOR232W 687 nt6.09□□□□□ -1.43
MSH4P40965 HPF1YOL155C 2904 nt6.09□□□□□ -1.43
MSH4P40965 SIR1YKR101W 1965 nt6.09□□□□□ -1.43
MSH4P40965 PCL8YPL219W 1479 nt6.09□□□□□ -1.44
MSH4P40965 PRM2YIL037C 1971 nt6.08□□□□□ -1.44
MSH4P40965 YFL034WYFL034W 3222 nt6.08□□□□□ -1.44
MSH4P40965 YDR524W-CYDR524W-C 90 nt6.08□□□□□ -1.44
MSH4P40965 YLL037WYLL037W 381 nt6.08□□□□□ -1.44
MSH4P40965 YLR042CYLR042C 486 nt6.08□□□□□ -1.44
MSH4P40965 PER33YLR064W 822 nt6.08□□□□□ -1.44
MSH4P40965 RAD10YML095C 633 nt6.08□□□□□ -1.44
MSH4P40965 HEK2YBL032W 1146 nt6.08□□□□□ -1.44
MSH4P40965 YBL044WYBL044W 369 nt6.08□□□□□ -1.44
MSH4P40965 TPT1YOL102C 693 nt6.08□□□□□ -1.44
MSH4P40965 RNY1YPL123C 1305 nt6.07□□□□□ -1.44
MSH4P40965 YEL053W-AYEL053W-A 348 nt6.07□□□□□ -1.44
MSH4P40965 YIP5YGL161C 933 nt6.07□□□□□ -1.44
MSH4P40965 YGL185CYGL185C 1140 nt6.07□□□□□ -1.44
MSH4P40965 CAB4YGR277C 918 nt6.07□□□□□ -1.44
MSH4P40965 PRP45YAL032C 1140 nt6.07□□□□□ -1.44
MSH4P40965 SUB1YMR039C 879 nt6.07□□□□□ -1.44
MSH4P40965 SPG4YMR107W 348 nt6.07□□□□□ -1.44
MSH4P40965 HOR7YMR251W-A 180 nt6.07□□□□□ -1.44
MSH4P40965 GPM3YOL056W 912 nt6.07□□□□□ -1.44
MSH4P40965 SNF8YPL002C 702 nt6.07□□□□□ -1.44
MSH4P40965 YBR053CYBR053C 1077 nt6.07□□□□□ -1.44
MSH4P40965 GRS1YBR121C 2004 nt6.07□□□□□ -1.44
MSH4P40965 HRP1YOL123W 1605 nt6.07□□□□□ -1.44
MSH4P40965 ATP16YDL004W 483 nt6.06□□□□□ -1.44
MSH4P40965 NUP42YDR192C 1293 nt6.06□□□□□ -1.44
MSH4P40965 COG2YGR120C 789 nt6.06□□□□□ -1.44
MSH4P40965 YHR175W-AYHR175W-A 150 nt6.06□□□□□ -1.44
MSH4P40965 YIL030W-AYIL030W-A 339 nt6.06□□□□□ -1.44
MSH4P40965 YJR085CYJR085C 318 nt6.06□□□□□ -1.44
MSH4P40965 NSE1YLR007W 1011 nt6.06□□□□□ -1.44
MSH4P40965 BUD28YLR062C 378 nt6.06□□□□□ -1.44
MSH4P40965 EMG1YLR186W 759 nt6.06□□□□□ -1.44
MSH4P40965 HMX1YLR205C 954 nt6.06□□□□□ -1.44
MSH4P40965 YPT6YLR262C 648 nt6.06□□□□□ -1.44
MSH4P40965 POP8YBL018C 402 nt6.06□□□□□ -1.44
MSH4P40965 RUF22RUF22 515 nt6.06□□□□□ -1.44
MSH4P40965 CNA1YLR433C 1662 nt6.06□□□□□ -1.44
MSH4P40965 BDP1YNL039W 1785 nt6.06□□□□□ -1.44
MSH4P40965 NSA1YGL111W 1392 nt6.06□□□□□ -1.44
MSH4P40965 NGL2YMR285C 1548 nt6.05□□□□□ -1.44
MSH4P40965 TMN2YDR107C 2019 nt6.05□□□□□ -1.44
MSH4P40965 YCR024C-BYCR024C-B 267 nt6.05□□□□□ -1.44
MSH4P40965 NHP10YDL002C 612 nt6.05□□□□□ -1.44
MSH4P40965 RFA3YJL173C 369 nt6.05□□□□□ -1.44
MSH4P40965 TTI2YJR136C 1266 nt6.05□□□□□ -1.44
MSH4P40965 ATG33YLR356W 594 nt6.05□□□□□ -1.44
MSH4P40965 GSP2YOR185C 663 nt6.05□□□□□ -1.44
MSH4P40965 HUA2YOR284W 732 nt6.05□□□□□ -1.44
MSH4P40965 NAT3YPR131C 588 nt6.05□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 57.4 ms