Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VSIG8P0DPA2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 AC004448.1-201ENST00000458332 883 ntBASIC19.1■□□□□ 0.65
VSIG8P0DPA2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.1■□□□□ 0.65
VSIG8P0DPA2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 MIR4281-201ENST00000580852 62 ntBASIC19.09■□□□□ 0.65
VSIG8P0DPA2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VSIG8P0DPA2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.08■□□□□ 0.65
VSIG8P0DPA2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.08■□□□□ 0.65
VSIG8P0DPA2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VSIG8P0DPA2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VSIG8P0DPA2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VSIG8P0DPA2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 KRT18P24-201ENST00000344739 1156 ntBASIC19.07■□□□□ 0.64
VSIG8P0DPA2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VSIG8P0DPA2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 AC139530.1-201ENST00000575312 1977 ntBASIC19.06■□□□□ 0.64
VSIG8P0DPA2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 AC007375.3-201ENST00000600936 2314 ntBASIC19.06■□□□□ 0.64
VSIG8P0DPA2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 THA1P-201ENST00000590384 1145 ntBASIC19.06■□□□□ 0.64
VSIG8P0DPA2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VSIG8P0DPA2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VSIG8P0DPA2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VSIG8P0DPA2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms