Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCA2P51587 AP006621.5-202ENST00000623692 636 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCA2P51587 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 AC061965.1-201ENST00000560524 1465 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 AL590824.1-201ENST00000403828 1349 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCA2P51587 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCA2P51587 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCA2P51587 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCA2P51587 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 AC009093.9-201ENST00000566038 1611 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 MIPEPP1-201ENST00000413533 2027 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCA2P51587 C2orf27AP2-201ENST00000438438 555 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC14.74□□□□□ -0.05
BRCA2P51587 IGHVII-33-1-201ENST00000524010 280 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCA2P51587 AL137028.1-201ENST00000620521 555 ntBASIC14.74□□□□□ -0.05
BRCA2P51587 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCA2P51587 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCA2P51587 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCA2P51587 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 MAS1LP1-206ENST00000419416 1047 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCA2P51587 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC14.73□□□□□ -0.05
BRCA2P51587 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
BRCA2P51587 RPL21P135-201ENST00000442539 791 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 EEF1DP8-201ENST00000534760 536 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCA2P51587 PRKN-210ENST00000612540 603 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 AC117500.5-201ENST00000623233 527 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCA2P51587 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 GAPDHP29-201ENST00000429913 985 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
BRCA2P51587 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRCA2P51587 Z98259.1-201ENST00000564261 1697 ntBASIC14.73□□□□□ -0.05
BRCA2P51587 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCA2P51587 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCA2P51587 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
BRCA2P51587 AL356653.1-201ENST00000402743 360 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
BRCA2P51587 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCA2P51587 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC14.72□□□□□ -0.05
BRCA2P51587 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 AC023908.3-201ENST00000564211 3047 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.72□□□□□ -0.05
BRCA2P51587 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRCA2P51587 COQ4-202ENST00000372875 928 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 ACTBP1-201ENST00000417985 1113 ntBASIC14.72□□□□□ -0.05
BRCA2P51587 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRCA2P51587 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC14.72□□□□□ -0.05
BRCA2P51587 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms