Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RNVU1-8-201ENST00000364272 125 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RN7SL23P-201ENST00000484055 275 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 MIR4472-1-201ENST00000584349 80 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CR392039.2-201ENST00000623182 509 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC023794.5-201ENST00000564380 2157 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC138761.6-201ENST00000583997 1423 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 CTBP2P8-201ENST00000422584 1330 ntBASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NPIPA3F8WFD2 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 OR52M2P-201ENST00000414298 959 ntBASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 ACTG1P19-201ENST00000418987 1116 ntBASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC092573.1-201ENST00000433054 884 ntBASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC132825.4-202ENST00000578792 434 ntBASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NPIPA3F8WFD2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms