Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RCL1Q9Y2P8 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RCL1Q9Y2P8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AL391825.1-201ENST00000457671 1364 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 TUBB2BP1-201ENST00000404155 871 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AL590640.2-201ENST00000457038 527 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AC106760.1-201ENST00000508690 800 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AC132192.2-201ENST00000596206 1147 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 WFDC1-204ENST00000613603 549 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AL136301.1-201ENST00000615830 422 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 AC023511.2-201ENST00000618803 211 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FAM95B1-212ENST00000592873 4692 ntBASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
RCL1Q9Y2P8 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AC134407.3-201ENST00000624035 2139 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MIR1233-2-201ENST00000408138 82 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 MIR1233-1-201ENST00000408722 82 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 GOLGA2P8-201ENST00000505201 779 ntBASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.32□□□□□ -0.6
RCL1Q9Y2P8 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms