Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm16165-201ENSMUST00000160140 795 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm19927-201ENSMUST00000185792 781 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm5738-201ENSMUST00000206016 779 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Gm5292-201ENSMUST00000073317 580 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Gm10020-201ENSMUST00000081993 612 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Atxn1P54254 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.68□□□□□ -0.7
Atxn1P54254 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Atxn1P54254 Mir705-201ENSMUST00000102058 82 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Atxn1P54254 Mir8091-201ENSMUST00000183602 139 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Gm27675-201ENSMUST00000184527 94 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm37597-201ENSMUST00000191853 382 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Gm38349-201ENSMUST00000195732 462 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Atxn1P54254 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.67□□□□□ -0.7
Atxn1P54254 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm7242-201ENSMUST00000221134 705 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Gm18065-201ENSMUST00000221395 526 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atxn1P54254 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.67□□□□□ -0.7
Atxn1P54254 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.67□□□□□ -0.7
Atxn1P54254 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Atxn1P54254 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Atxn1P54254 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Gm11380-201ENSMUST00000118067 560 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Gm15373-201ENSMUST00000121495 214 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Atxn1P54254 Snord55-201ENSMUST00000174939 79 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms