Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 MIR1202-201ENST00000408529 83 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PIN1P1-201ENST00000412108 996 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AC092580.1-201ENST00000433998 658 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 KLF2P1-201ENST00000447438 1042 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PGAM1P5-201ENST00000548011 764 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AL161773.1-201ENST00000624845 863 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 Z98259.2-201ENST00000641583 609 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AL031432.4-201ENST00000641729 2190 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AC092028.1-202ENST00000641483 3547 ntBASIC11.9□□□□□ -0.51
TMEM235A6NFC5 AC092028.1-201ENST00000641781 3540 ntBASIC11.9□□□□□ -0.51
TMEM235A6NFC5 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM235A6NFC5 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 CNN2P8-201ENST00000421872 913 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AC016694.1-201ENST00000434179 700 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 KRT90P-201ENST00000549264 1064 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 C2orf69P2-201ENST00000562032 1123 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 TP53TG3HP-202ENST00000569755 579 ntBASIC11.89□□□□□ -0.51
TMEM235A6NFC5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.89□□□□□ -0.51
TMEM235A6NFC5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms