Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 KRT17P4-201ENST00000429445 819 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 PTGER4P3-201ENST00000458150 252 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AL591926.3-201ENST00000611630 238 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 HMGB1P24-201ENST00000611897 328 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SDCBP2P1-201ENST00000416115 614 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AL080243.1-201ENST00000423293 1060 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 RN7SL162P-201ENST00000579233 292 ntBASIC21.21■□□□□ 0.99
VPS8Q8N3P4 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS8Q8N3P4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 AC063952.3-201ENST00000467756 308 ntBASIC21.2■□□□□ 0.98
VPS8Q8N3P4 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 AC138466.4-201ENST00000623965 852 ntBASIC21.2■□□□□ 0.98
VPS8Q8N3P4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS8Q8N3P4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 NRADDP-201ENST00000437305 691 ntBASIC21.19■□□□□ 0.98
VPS8Q8N3P4 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC21.19■□□□□ 0.98
VPS8Q8N3P4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS8Q8N3P4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 MKRN5P-201ENST00000445263 1467 ntBASIC21.18■□□□□ 0.98
VPS8Q8N3P4 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms