Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 KRT43P-201ENST00000434019 910 ntBASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 TTTY23B-201ENST00000442790 549 ntBASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 AC090386.2-201ENST00000623010 1039 ntBASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 AC008040.5-201ENST00000599781 1781 ntBASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 LINC00115-201ENST00000473798 1317 ntBASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ANKRD55Q3KP44 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.58□□□□□ -0.55
ANKRD55Q3KP44 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
ANKRD55Q3KP44 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TRIM80P-201ENST00000455685 2848 ntBASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AL645933.1-201ENST00000440087 609 ntBASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AC012441.1-201ENST00000446669 685 ntBASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AC134312.5-201ENST00000568031 1313 ntBASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.58□□□□□ -0.56
ANKRD55Q3KP44 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 OR2I1P-208ENST00000641137 4948 ntBASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ANKRD55Q3KP44 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms