Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
VTNP04004 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 AC022080.1-201ENST00000366255 781 ntBASIC15.11■□□□□ 0.01
VTNP04004 MIR1301-201ENST00000408518 82 ntBASIC15.11■□□□□ 0.01
VTNP04004 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.11■□□□□ 0.01
VTNP04004 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.11■□□□□ 0.01
VTNP04004 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 AC087203.1-201ENST00000532111 1181 ntBASIC15.11■□□□□ 0.01
VTNP04004 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.11■□□□□ 0.01
VTNP04004 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 CYP4F36P-201ENST00000589193 186 ntBASIC15.11■□□□□ 0.01
VTNP04004 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VTNP04004 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VTNP04004 FKBP4P8-201ENST00000610931 1369 ntBASIC15.11■□□□□ 0.01
VTNP04004 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.11■□□□□ 0.01
VTNP04004 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
VTNP04004 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VTNP04004 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VTNP04004 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 U3.5-201ENST00000363448 216 ntBASIC15.1■□□□□ 0.01
VTNP04004 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 MIR566-201ENST00000385187 94 ntBASIC15.1■□□□□ 0.01
VTNP04004 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VTNP04004 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 AC005077.3-201ENST00000449614 213 ntBASIC15.1■□□□□ 0.01
VTNP04004 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.1■□□□□ 0.01
VTNP04004 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VTNP04004 PEBP1P2-201ENST00000603980 558 ntBASIC15.1■□□□□ 0.01
VTNP04004 CSTP2-201ENST00000610599 398 ntBASIC15.1■□□□□ 0.01
VTNP04004 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.1■□□□□ 0.01
VTNP04004 AC026120.2-201ENST00000617239 309 ntBASIC15.1■□□□□ 0.01
VTNP04004 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.1■□□□□ 0.01
VTNP04004 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.1■□□□□ 0.01
VTNP04004 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.1■□□□□ 0.01
VTNP04004 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.1■□□□□ 0.01
VTNP04004 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
VTNP04004 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VTNP04004 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VTNP04004 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms