Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 AC234782.1-201ENST00000451950 919 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 IGHJ2P-201ENST00000454480 60 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.79□□□□□ -0.36
NKX2-2O95096 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 RN7SL767P-201ENST00000493013 295 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-2O95096 MIR4522-201ENST00000584932 87 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 AC084346.2-201ENST00000607097 949 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 PCDHA5-203ENST00000614258 4248 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NKX2-2O95096 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-2O95096 RN7SL81P-201ENST00000493781 261 ntBASIC12.78□□□□□ -0.36
NKX2-2O95096 IGLV3-15-201ENST00000518356 244 ntBASIC12.78□□□□□ -0.36
NKX2-2O95096 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-2O95096 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-2O95096 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
NKX2-2O95096 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-2O95096 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-2O95096 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-2O95096 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-2O95096 MIR2392-201ENST00000584881 84 ntBASIC12.78□□□□□ -0.36
NKX2-2O95096 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.78□□□□□ -0.36
NKX2-2O95096 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-2O95096 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-2O95096 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-2O95096 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
NKX2-2O95096 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-2O95096 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms