Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AL591926.3-201ENST00000611630 238 ntBASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 AC026271.1-201ENST00000447794 1348 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 KRT8P5-201ENST00000592443 1458 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 POLR2LP1-206ENST00000444785 187 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 DPY19L2P4-201ENST00000479881 442 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 FAM213AP2-201ENST00000521579 683 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 OR3A1-202ENST00000615105 966 ntBASIC20■□□□□ 0.79
SHANK2Q9UPX8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHANK2Q9UPX8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC20■□□□□ 0.79
SHANK2Q9UPX8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 COQ4-202ENST00000372875 928 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AC244097.1-201ENST00000621631 1216 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 LINC02228-204ENST00000642115 2962 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AC005154.3-201ENST00000419639 1393 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AL121753.2-201ENST00000624581 1461 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AC024475.2-201ENST00000312173 879 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 OR2T32P-201ENST00000403423 963 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 FAM183BP-201ENST00000409072 1595 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 RN7SKP212-201ENST00000410851 328 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AL121994.1-201ENST00000413189 402 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 AC113398.1-201ENST00000464124 406 ntBASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHANK2Q9UPX8 CLPP-205ENST00000596605 646 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms