Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
TRPM3Q9HCF6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
TRPM3Q9HCF6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
TRPM3Q9HCF6 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.7■■■□□ 2.5
TRPM3Q9HCF6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.7■■■□□ 2.5
TRPM3Q9HCF6 TPRG1LP1-201ENST00000598702 760 ntBASIC30.7■■■□□ 2.5
TRPM3Q9HCF6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.69■■■□□ 2.5
TRPM3Q9HCF6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 AC006015.1-201ENST00000429970 570 ntBASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRPM3Q9HCF6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
TRPM3Q9HCF6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRPM3Q9HCF6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRPM3Q9HCF6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRPM3Q9HCF6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRPM3Q9HCF6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
TRPM3Q9HCF6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.5
TRPM3Q9HCF6 AC073111.5-205ENST00000641717 521 ntBASIC30.64■■■□□ 2.5
TRPM3Q9HCF6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.64■■■□□ 2.49
TRPM3Q9HCF6 AC091060.1-201ENST00000623524 1766 ntBASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRPM3Q9HCF6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 LINC02228-203ENST00000641970 1355 ntBASIC30.62■■■□□ 2.49
TRPM3Q9HCF6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
TRPM3Q9HCF6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRPM3Q9HCF6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 AP005435.1-201ENST00000529293 1178 ntBASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.59■■■□□ 2.49
TRPM3Q9HCF6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms