Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps33aQ9D2N9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps33aQ9D2N9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps33aQ9D2N9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps33aQ9D2N9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps33aQ9D2N9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps33aQ9D2N9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps33aQ9D2N9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps33aQ9D2N9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps33aQ9D2N9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps33aQ9D2N9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps33aQ9D2N9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Vps33aQ9D2N9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps33aQ9D2N9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Grk6-206ENSMUST00000224995 2971 ntBASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.19■□□□□ 0.98
Vps33aQ9D2N9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps33aQ9D2N9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps33aQ9D2N9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps33aQ9D2N9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps33aQ9D2N9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms