Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF6BQ99941 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATF6BQ99941 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATF6BQ99941 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF6BQ99941 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF6BQ99941 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATF6BQ99941 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF6BQ99941 YBX1P4-201ENST00000392794 808 ntBASIC20.03■□□□□ 0.8
ATF6BQ99941 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATF6BQ99941 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.03■□□□□ 0.8
ATF6BQ99941 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.03■□□□□ 0.8
ATF6BQ99941 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATF6BQ99941 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF6BQ99941 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATF6BQ99941 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ATF6BQ99941 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.02■□□□□ 0.8
ATF6BQ99941 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF6BQ99941 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.02■□□□□ 0.8
ATF6BQ99941 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF6BQ99941 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATF6BQ99941 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.79
ATF6BQ99941 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATF6BQ99941 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.01■□□□□ 0.79
ATF6BQ99941 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.01■□□□□ 0.79
ATF6BQ99941 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.01■□□□□ 0.79
ATF6BQ99941 AC103834.1-201ENST00000520383 144 ntBASIC20.01■□□□□ 0.79
ATF6BQ99941 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.01■□□□□ 0.79
ATF6BQ99941 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATF6BQ99941 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATF6BQ99941 AF131216.4-201ENST00000638924 1588 ntBASIC20■□□□□ 0.79
ATF6BQ99941 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ATF6BQ99941 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ATF6BQ99941 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ATF6BQ99941 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATF6BQ99941 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATF6BQ99941 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20■□□□□ 0.79
ATF6BQ99941 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20■□□□□ 0.79
ATF6BQ99941 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20■□□□□ 0.79
ATF6BQ99941 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATF6BQ99941 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
ATF6BQ99941 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ATF6BQ99941 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.99■□□□□ 0.79
ATF6BQ99941 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
ATF6BQ99941 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ATF6BQ99941 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATF6BQ99941 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ATF6BQ99941 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ATF6BQ99941 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.98■□□□□ 0.79
ATF6BQ99941 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATF6BQ99941 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATF6BQ99941 AC103724.3-201ENST00000564481 992 ntBASIC19.98■□□□□ 0.79
ATF6BQ99941 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ATF6BQ99941 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ATF6BQ99941 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATF6BQ99941 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATF6BQ99941 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.98■□□□□ 0.79
ATF6BQ99941 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ATF6BQ99941 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATF6BQ99941 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF6BQ99941 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF6BQ99941 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ATF6BQ99941 ALDH1A3-203ENST00000557963 1670 ntBASIC19.97■□□□□ 0.79
ATF6BQ99941 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATF6BQ99941 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF6BQ99941 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF6BQ99941 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATF6BQ99941 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATF6BQ99941 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms