Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 AC141586.5-201ENST00000624546 2050 ntBASIC14.26□□□□□ -0.13
SVIPQ8NHG7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.26□□□□□ -0.13
SVIPQ8NHG7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SVIPQ8NHG7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SVIPQ8NHG7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.23□□□□□ -0.13
SVIPQ8NHG7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.22□□□□□ -0.13
SVIPQ8NHG7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 AL133373.2-201ENST00000623187 2828 ntBASIC14.21□□□□□ -0.13
SVIPQ8NHG7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SVIPQ8NHG7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SVIPQ8NHG7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SVIPQ8NHG7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SVIPQ8NHG7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SVIPQ8NHG7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SVIPQ8NHG7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.2□□□□□ -0.14
SVIPQ8NHG7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SVIPQ8NHG7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms