Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NIPAL3Q6P499 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 TSPY9P-201ENST00000440215 945 ntBASIC20.33■□□□□ 0.85
NIPAL3Q6P499 TSPY11P-201ENST00000442607 1045 ntBASIC20.33■□□□□ 0.85
NIPAL3Q6P499 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.33■□□□□ 0.85
NIPAL3Q6P499 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NIPAL3Q6P499 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.33■□□□□ 0.84
NIPAL3Q6P499 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.33■□□□□ 0.84
NIPAL3Q6P499 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPAL3Q6P499 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NIPAL3Q6P499 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.33■□□□□ 0.84
NIPAL3Q6P499 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 ALDH1A3-203ENST00000557963 1670 ntBASIC20.32■□□□□ 0.84
NIPAL3Q6P499 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NIPAL3Q6P499 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NIPAL3Q6P499 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 GUSBP5-202ENST00000510805 1989 ntBASIC20.3■□□□□ 0.84
NIPAL3Q6P499 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 MTDHP2-201ENST00000601468 714 ntBASIC20.3■□□□□ 0.84
NIPAL3Q6P499 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NIPAL3Q6P499 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NIPAL3Q6P499 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms