Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 BID-214ENST00000617586 542 ntTSL 5 BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
SNAPC4Q5SXM2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC37.34■■■■□ 3.57
SNAPC4Q5SXM2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
SNAPC4Q5SXM2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
SNAPC4Q5SXM2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC37.33■■■■□ 3.57
SNAPC4Q5SXM2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC37.33■■■■□ 3.57
SNAPC4Q5SXM2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC37.32■■■■□ 3.56
SNAPC4Q5SXM2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC37.32■■■■□ 3.56
SNAPC4Q5SXM2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
SNAPC4Q5SXM2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC37.32■■■■□ 3.56
SNAPC4Q5SXM2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC37.31■■■■□ 3.56
SNAPC4Q5SXM2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC37.31■■■■□ 3.56
SNAPC4Q5SXM2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
SNAPC4Q5SXM2 AL499627.2-201ENST00000606283 725 ntBASIC37.31■■■■□ 3.56
SNAPC4Q5SXM2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
SNAPC4Q5SXM2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
SNAPC4Q5SXM2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC37.3■■■■□ 3.56
SNAPC4Q5SXM2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC37.3■■■■□ 3.56
SNAPC4Q5SXM2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC37.29■■■■□ 3.56
SNAPC4Q5SXM2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC37.29■■■■□ 3.56
SNAPC4Q5SXM2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC37.29■■■■□ 3.56
SNAPC4Q5SXM2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
SNAPC4Q5SXM2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 CD99P1-205ENST00000527459 561 ntBASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 AC105233.4-201ENST00000642045 216 ntBASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 AC004854.2-201ENST00000608450 1441 ntBASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
SNAPC4Q5SXM2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
SNAPC4Q5SXM2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC37.27■■■■□ 3.56
SNAPC4Q5SXM2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC37.27■■■■□ 3.56
SNAPC4Q5SXM2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC37.27■■■■□ 3.56
SNAPC4Q5SXM2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC37.27■■■■□ 3.56
SNAPC4Q5SXM2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC37.26■■■■□ 3.56
SNAPC4Q5SXM2 AP004607.4-201ENST00000530158 1459 ntBASIC37.26■■■■□ 3.56
SNAPC4Q5SXM2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
SNAPC4Q5SXM2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC37.25■■■■□ 3.55
SNAPC4Q5SXM2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC37.25■■■■□ 3.55
SNAPC4Q5SXM2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC37.25■■■■□ 3.55
SNAPC4Q5SXM2 SLC6A10P-202ENST00000431994 2058 ntBASIC37.25■■■■□ 3.55
SNAPC4Q5SXM2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 APTR-205ENST00000447009 902 ntTSL 2 BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC37.24■■■■□ 3.55
SNAPC4Q5SXM2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC37.23■■■■□ 3.55
SNAPC4Q5SXM2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 TSPY20P-201ENST00000450910 630 ntBASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
SNAPC4Q5SXM2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
SNAPC4Q5SXM2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC37.21■■■■□ 3.55
SNAPC4Q5SXM2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC37.21■■■■□ 3.55
SNAPC4Q5SXM2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
SNAPC4Q5SXM2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
SNAPC4Q5SXM2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 AC142086.2-201ENST00000569753 217 ntBASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
SNAPC4Q5SXM2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC37.2■■■■□ 3.54
SNAPC4Q5SXM2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC37.2■■■■□ 3.54
SNAPC4Q5SXM2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC37.19■■■■□ 3.54
SNAPC4Q5SXM2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC37.19■■■■□ 3.54
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms