Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.82■□□□□ 0.6
Gbx1P82976 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gbx1P82976 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gbx1P82976 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gbx1P82976 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Gbx1P82976 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.81■□□□□ 0.6
Gbx1P82976 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.81■□□□□ 0.6
Gbx1P82976 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gbx1P82976 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.8■□□□□ 0.6
Gbx1P82976 Gm15820-201ENSMUST00000201566 728 ntBASIC18.8■□□□□ 0.6
Gbx1P82976 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gbx1P82976 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gbx1P82976 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
Gbx1P82976 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Gbx1P82976 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Gbx1P82976 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gbx1P82976 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gbx1P82976 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.79■□□□□ 0.6
Gbx1P82976 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gbx1P82976 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gbx1P82976 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gbx1P82976 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Gbx1P82976 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.77■□□□□ 0.6
Gbx1P82976 Gm5812-201ENSMUST00000061073 957 ntBASIC18.77■□□□□ 0.6
Gbx1P82976 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gbx1P82976 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gbx1P82976 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gbx1P82976 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Gbx1P82976 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Gbx1P82976 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gbx1P82976 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.76■□□□□ 0.59
Gbx1P82976 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.76■□□□□ 0.59
Gbx1P82976 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gbx1P82976 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gbx1P82976 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gbx1P82976 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.75■□□□□ 0.59
Gbx1P82976 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gbx1P82976 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gbx1P82976 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gbx1P82976 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.74■□□□□ 0.59
Gbx1P82976 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gbx1P82976 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gbx1P82976 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
Gbx1P82976 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gbx1P82976 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.73■□□□□ 0.59
Gbx1P82976 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.73■□□□□ 0.59
Gbx1P82976 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Gbx1P82976 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gbx1P82976 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Gbx1P82976 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gbx1P82976 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms