Protein–RNA interactions for Protein: P62965

Crabp1, Cellular retinoic acid-binding protein 1, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crabp1P62965 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crabp1P62965 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.87■□□□□ 0.45
Crabp1P62965 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Crabp1P62965 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crabp1P62965 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Crabp1P62965 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crabp1P62965 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crabp1P62965 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.85■□□□□ 0.45
Crabp1P62965 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Crabp1P62965 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Gm7417-201ENSMUST00000192950 473 ntBASIC17.85■□□□□ 0.45
Crabp1P62965 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.85■□□□□ 0.45
Crabp1P62965 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.85■□□□□ 0.45
Crabp1P62965 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Crabp1P62965 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.84■□□□□ 0.45
Crabp1P62965 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
Crabp1P62965 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Crabp1P62965 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Crabp1P62965 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.84■□□□□ 0.45
Crabp1P62965 Gm15546-201ENSMUST00000122095 826 ntBASIC17.84■□□□□ 0.45
Crabp1P62965 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Crabp1P62965 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Crabp1P62965 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Crabp1P62965 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Crabp1P62965 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Crabp1P62965 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.83■□□□□ 0.45
Crabp1P62965 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Crabp1P62965 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.83■□□□□ 0.44
Crabp1P62965 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.83■□□□□ 0.44
Crabp1P62965 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Crabp1P62965 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Crabp1P62965 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Crabp1P62965 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Crabp1P62965 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Crabp1P62965 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Crabp1P62965 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Crabp1P62965 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Crabp1P62965 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Crabp1P62965 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Crabp1P62965 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Crabp1P62965 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Crabp1P62965 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crabp1P62965 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.81■□□□□ 0.44
Crabp1P62965 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crabp1P62965 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crabp1P62965 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.81■□□□□ 0.44
Crabp1P62965 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crabp1P62965 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Crabp1P62965 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.8■□□□□ 0.44
Crabp1P62965 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Gm9870-201ENSMUST00000063874 645 ntBASIC17.8■□□□□ 0.44
Crabp1P62965 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Crabp1P62965 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crabp1P62965 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.79■□□□□ 0.44
Crabp1P62965 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Crabp1P62965 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crabp1P62965 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Crabp1P62965 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crabp1P62965 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Crabp1P62965 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms