Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RxrbP28704 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.14■□□□□ 0.81
RxrbP28704 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.14■□□□□ 0.81
RxrbP28704 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RxrbP28704 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RxrbP28704 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RxrbP28704 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.13■□□□□ 0.81
RxrbP28704 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RxrbP28704 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RxrbP28704 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RxrbP28704 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RxrbP28704 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.11■□□□□ 0.81
RxrbP28704 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RxrbP28704 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RxrbP28704 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RxrbP28704 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RxrbP28704 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RxrbP28704 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RxrbP28704 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RxrbP28704 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RxrbP28704 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RxrbP28704 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RxrbP28704 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.09■□□□□ 0.81
RxrbP28704 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.09■□□□□ 0.81
RxrbP28704 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.09■□□□□ 0.81
RxrbP28704 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.09■□□□□ 0.81
RxrbP28704 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.09■□□□□ 0.81
RxrbP28704 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrbP28704 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RxrbP28704 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RxrbP28704 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RxrbP28704 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.08■□□□□ 0.81
RxrbP28704 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RxrbP28704 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.08■□□□□ 0.81
RxrbP28704 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RxrbP28704 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RxrbP28704 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrbP28704 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RxrbP28704 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RxrbP28704 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RxrbP28704 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrbP28704 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RxrbP28704 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RxrbP28704 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.06■□□□□ 0.8
RxrbP28704 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.06■□□□□ 0.8
RxrbP28704 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RxrbP28704 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RxrbP28704 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrbP28704 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RxrbP28704 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms