Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMP24386 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMP24386 SNX5-217ENST00000606557 1087 ntBASIC20.87■□□□□ 0.93
CHMP24386 AC010997.5-201ENST00000609182 354 ntBASIC20.87■□□□□ 0.93
CHMP24386 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.87■□□□□ 0.93
CHMP24386 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHMP24386 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP24386 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP24386 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP24386 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHMP24386 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.86■□□□□ 0.93
CHMP24386 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHMP24386 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP24386 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP24386 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHMP24386 C1orf229-201ENST00000623686 2258 ntBASIC20.85■□□□□ 0.93
CHMP24386 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP24386 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP24386 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP24386 AC004448.1-201ENST00000458332 883 ntBASIC20.85■□□□□ 0.93
CHMP24386 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP24386 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP24386 MIR6722-201ENST00000617286 78 ntBASIC20.85■□□□□ 0.93
CHMP24386 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP24386 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP24386 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP24386 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP24386 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHMP24386 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP24386 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP24386 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP24386 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.84■□□□□ 0.93
CHMP24386 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP24386 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHMP24386 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP24386 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP24386 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP24386 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP24386 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP24386 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP24386 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CHMP24386 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP24386 MIR6724-1-201ENST00000616420 92 ntBASIC20.82■□□□□ 0.92
CHMP24386 MIR6724-2-201ENST00000616483 92 ntBASIC20.82■□□□□ 0.92
CHMP24386 MIR6724-4-201ENST00000617390 92 ntBASIC20.82■□□□□ 0.92
CHMP24386 MIR6724-3-201ENST00000622482 92 ntBASIC20.82■□□□□ 0.92
CHMP24386 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP24386 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP24386 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP24386 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP24386 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHMP24386 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP24386 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP24386 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP24386 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CHMP24386 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP24386 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP24386 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CHMP24386 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP24386 LINC00565-201ENST00000562710 2331 ntBASIC20.81■□□□□ 0.92
CHMP24386 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP24386 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP24386 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP24386 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP24386 AL022069.1-201ENST00000568025 1636 ntBASIC20.8■□□□□ 0.92
CHMP24386 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP24386 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP24386 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHMP24386 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CHMP24386 AL161729.1-201ENST00000604104 1402 ntBASIC20.79■□□□□ 0.92
CHMP24386 AC131274.2-201ENST00000580697 1507 ntBASIC20.79■□□□□ 0.92
CHMP24386 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP24386 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP24386 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP24386 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP24386 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP24386 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.79■□□□□ 0.92
CHMP24386 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CHMP24386 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.79■□□□□ 0.92
CHMP24386 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHMP24386 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms