Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3BP20337 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3BP20337 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3BP20337 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3BP20337 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3BP20337 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3BP20337 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3BP20337 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3BP20337 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 AL592295.1-201ENST00000400984 884 ntBASIC19.6■□□□□ 0.73
RAB3BP20337 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB3BP20337 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3BP20337 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB3BP20337 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3BP20337 AC092053.2-201ENST00000640557 1818 ntBASIC19.6■□□□□ 0.73
RAB3BP20337 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB3BP20337 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3BP20337 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB3BP20337 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB3BP20337 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB3BP20337 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3BP20337 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3BP20337 C11orf96-202ENST00000528572 1834 ntBASIC19.58■□□□□ 0.73
RAB3BP20337 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB3BP20337 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB3BP20337 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3BP20337 RPS2P7-201ENST00000447334 885 ntBASIC19.58■□□□□ 0.72
RAB3BP20337 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB3BP20337 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB3BP20337 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3BP20337 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3BP20337 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3BP20337 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3BP20337 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAB3BP20337 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB3BP20337 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAB3BP20337 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB3BP20337 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB3BP20337 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3BP20337 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3BP20337 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3BP20337 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAB3BP20337 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3BP20337 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3BP20337 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB3BP20337 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB3BP20337 AC139530.1-201ENST00000575312 1977 ntBASIC19.55■□□□□ 0.72
RAB3BP20337 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAB3BP20337 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB3BP20337 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RAB3BP20337 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB3BP20337 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3BP20337 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RAB3BP20337 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3BP20337 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3BP20337 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3BP20337 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3BP20337 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms