Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PFDN1O60925 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.12■□□□□ 0.81
PFDN1O60925 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PFDN1O60925 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PFDN1O60925 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.11■□□□□ 0.81
PFDN1O60925 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.11■□□□□ 0.81
PFDN1O60925 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PFDN1O60925 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 AL020996.1-203ENST00000536896 2307 ntBASIC20.11■□□□□ 0.81
PFDN1O60925 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PFDN1O60925 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.11■□□□□ 0.81
PFDN1O60925 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.11■□□□□ 0.81
PFDN1O60925 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PFDN1O60925 LINC01521-201ENST00000504184 1943 ntBASIC20.1■□□□□ 0.81
PFDN1O60925 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PFDN1O60925 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PFDN1O60925 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.1■□□□□ 0.81
PFDN1O60925 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PFDN1O60925 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PFDN1O60925 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PFDN1O60925 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PFDN1O60925 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PFDN1O60925 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PFDN1O60925 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PFDN1O60925 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PFDN1O60925 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.08■□□□□ 0.81
PFDN1O60925 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PFDN1O60925 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PFDN1O60925 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PFDN1O60925 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PFDN1O60925 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PFDN1O60925 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PFDN1O60925 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PFDN1O60925 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PFDN1O60925 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PFDN1O60925 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PFDN1O60925 C11orf96-202ENST00000528572 1834 ntBASIC20.06■□□□□ 0.8
PFDN1O60925 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PFDN1O60925 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PFDN1O60925 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PFDN1O60925 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PFDN1O60925 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.06■□□□□ 0.8
PFDN1O60925 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PFDN1O60925 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PFDN1O60925 AL157384.1-201ENST00000445995 2473 ntBASIC20.05■□□□□ 0.8
PFDN1O60925 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PFDN1O60925 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
PFDN1O60925 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.05■□□□□ 0.8
PFDN1O60925 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.05■□□□□ 0.8
PFDN1O60925 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PFDN1O60925 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.04■□□□□ 0.8
PFDN1O60925 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PFDN1O60925 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PFDN1O60925 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PFDN1O60925 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PFDN1O60925 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PFDN1O60925 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PFDN1O60925 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PFDN1O60925 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms