Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 AC083906.2-201ENST00000511578 360 ntBASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 TPRG1LP1-201ENST00000598702 760 ntBASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.58■■□□□ 1.85
TMEM88BA6NKF7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 OR2I1P-207ENST00000453522 948 ntBASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM88BA6NKF7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM88BA6NKF7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM88BA6NKF7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.55■■□□□ 1.84
TMEM88BA6NKF7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM88BA6NKF7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM88BA6NKF7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
TMEM88BA6NKF7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.54■■□□□ 1.84
TMEM88BA6NKF7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 AC087239.1-201ENST00000622671 572 ntBASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM88BA6NKF7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 AL050303.2-201ENST00000619798 666 ntBASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.52■■□□□ 1.84
TMEM88BA6NKF7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
TMEM88BA6NKF7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 AC069152.1-201ENST00000438030 544 ntBASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 AL138781.1-201ENST00000566567 1274 ntBASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM88BA6NKF7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 GUSBP6-202ENST00000438529 1198 ntBASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.5■■□□□ 1.83
TMEM88BA6NKF7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM88BA6NKF7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 SLC7A5P2-201ENST00000553010 536 ntBASIC26.48■■□□□ 1.83
TMEM88BA6NKF7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms