Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PdfS4R2K0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PdfS4R2K0 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.49■□□□□ 0.71
PdfS4R2K0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdfS4R2K0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdfS4R2K0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdfS4R2K0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdfS4R2K0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
PdfS4R2K0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdfS4R2K0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdfS4R2K0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdfS4R2K0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdfS4R2K0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PdfS4R2K0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdfS4R2K0 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.41■□□□□ 0.7
PdfS4R2K0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdfS4R2K0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdfS4R2K0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PdfS4R2K0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PdfS4R2K0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.38■□□□□ 0.69
PdfS4R2K0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PdfS4R2K0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdfS4R2K0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.35■□□□□ 0.69
PdfS4R2K0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PdfS4R2K0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.33■□□□□ 0.68
PdfS4R2K0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdfS4R2K0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdfS4R2K0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdfS4R2K0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdfS4R2K0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.31■□□□□ 0.68
PdfS4R2K0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PdfS4R2K0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdfS4R2K0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PdfS4R2K0 Gm26115-201ENSMUST00000175605 87 ntBASIC19.29■□□□□ 0.68
PdfS4R2K0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PdfS4R2K0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PdfS4R2K0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdfS4R2K0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.28■□□□□ 0.68
PdfS4R2K0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PdfS4R2K0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PdfS4R2K0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.27■□□□□ 0.68
PdfS4R2K0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PdfS4R2K0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdfS4R2K0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdfS4R2K0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdfS4R2K0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PdfS4R2K0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PdfS4R2K0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PdfS4R2K0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PdfS4R2K0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PdfS4R2K0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdfS4R2K0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdfS4R2K0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdfS4R2K0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdfS4R2K0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.21■□□□□ 0.67
PdfS4R2K0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PdfS4R2K0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.2■□□□□ 0.66
PdfS4R2K0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PdfS4R2K0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PdfS4R2K0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdfS4R2K0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdfS4R2K0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.18■□□□□ 0.66
PdfS4R2K0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdfS4R2K0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdfS4R2K0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.18■□□□□ 0.66
PdfS4R2K0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdfS4R2K0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdfS4R2K0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdfS4R2K0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdfS4R2K0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdfS4R2K0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdfS4R2K0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdfS4R2K0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.15■□□□□ 0.66
PdfS4R2K0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdfS4R2K0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdfS4R2K0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PdfS4R2K0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PdfS4R2K0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdfS4R2K0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdfS4R2K0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PdfS4R2K0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdfS4R2K0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdfS4R2K0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PdfS4R2K0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PdfS4R2K0 Gm8109-201ENSMUST00000194076 746 ntBASIC19.07■□□□□ 0.64
PdfS4R2K0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PdfS4R2K0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PdfS4R2K0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.07■□□□□ 0.64
PdfS4R2K0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PdfS4R2K0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PdfS4R2K0 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.05■□□□□ 0.64
PdfS4R2K0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PdfS4R2K0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PdfS4R2K0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PdfS4R2K0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PdfS4R2K0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PdfS4R2K0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PdfS4R2K0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PdfS4R2K0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PdfS4R2K0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms