Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5493S4R2D1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm5493S4R2D1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm5493S4R2D1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5493S4R2D1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5493S4R2D1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5493S4R2D1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5493S4R2D1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Gm5493S4R2D1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5493S4R2D1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5493S4R2D1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5493S4R2D1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.74■■□□□ 1.07
Gm5493S4R2D1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5493S4R2D1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Gm5493S4R2D1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5493S4R2D1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5493S4R2D1 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.71■■□□□ 1.07
Gm5493S4R2D1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5493S4R2D1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5493S4R2D1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm5493S4R2D1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5493S4R2D1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5493S4R2D1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5493S4R2D1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5493S4R2D1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm5493S4R2D1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5493S4R2D1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5493S4R2D1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm5493S4R2D1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5493S4R2D1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm5493S4R2D1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5493S4R2D1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm5493S4R2D1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gm5493S4R2D1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Gm5493S4R2D1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm5493S4R2D1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.54■■□□□ 1.04
Gm5493S4R2D1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm5493S4R2D1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm5493S4R2D1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm5493S4R2D1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm5493S4R2D1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm5493S4R2D1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm5493S4R2D1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm5493S4R2D1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5493S4R2D1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm5493S4R2D1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.47■■□□□ 1.03
Gm5493S4R2D1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Gm5493S4R2D1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5493S4R2D1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5493S4R2D1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5493S4R2D1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5493S4R2D1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.45■■□□□ 1.02
Gm5493S4R2D1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
Gm5493S4R2D1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5493S4R2D1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5493S4R2D1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5493S4R2D1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
Gm5493S4R2D1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5493S4R2D1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5493S4R2D1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Gm5493S4R2D1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5493S4R2D1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5493S4R2D1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.39■■□□□ 1.02
Gm5493S4R2D1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm5493S4R2D1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5493S4R2D1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5493S4R2D1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm5493S4R2D1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Gm5493S4R2D1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm5493S4R2D1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5493S4R2D1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5493S4R2D1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm5493S4R2D1 Gm25238-201ENSMUST00000174914 89 ntBASIC21.34■■□□□ 1.01
Gm5493S4R2D1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Gm5493S4R2D1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gm5493S4R2D1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gm5493S4R2D1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm5493S4R2D1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Gm5493S4R2D1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm5493S4R2D1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.3■■□□□ 1
Gm5493S4R2D1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5493S4R2D1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5493S4R2D1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Gm5493S4R2D1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5493S4R2D1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.28■■□□□ 1
Gm5493S4R2D1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5493S4R2D1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5493S4R2D1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5493S4R2D1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5493S4R2D1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5493S4R2D1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5493S4R2D1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5493S4R2D1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5493S4R2D1 Amer2-203ENSMUST00000225247 2662 ntBASIC21.22■□□□□ 0.99
Gm5493S4R2D1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5493S4R2D1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5493S4R2D1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm5493S4R2D1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5493S4R2D1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5493S4R2D1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms