Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ssna1Q9JJ94 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ssna1Q9JJ94 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssna1Q9JJ94 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssna1Q9JJ94 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ssna1Q9JJ94 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssna1Q9JJ94 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssna1Q9JJ94 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssna1Q9JJ94 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssna1Q9JJ94 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssna1Q9JJ94 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ssna1Q9JJ94 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssna1Q9JJ94 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssna1Q9JJ94 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssna1Q9JJ94 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssna1Q9JJ94 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssna1Q9JJ94 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ssna1Q9JJ94 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssna1Q9JJ94 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ssna1Q9JJ94 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssna1Q9JJ94 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ssna1Q9JJ94 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssna1Q9JJ94 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssna1Q9JJ94 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssna1Q9JJ94 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssna1Q9JJ94 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssna1Q9JJ94 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ssna1Q9JJ94 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssna1Q9JJ94 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssna1Q9JJ94 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssna1Q9JJ94 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ssna1Q9JJ94 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21■□□□□ 0.95
Ssna1Q9JJ94 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssna1Q9JJ94 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Ssna1Q9JJ94 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Ssna1Q9JJ94 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssna1Q9JJ94 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ssna1Q9JJ94 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssna1Q9JJ94 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssna1Q9JJ94 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ssna1Q9JJ94 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssna1Q9JJ94 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.93■□□□□ 0.94
Ssna1Q9JJ94 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssna1Q9JJ94 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ssna1Q9JJ94 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssna1Q9JJ94 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ssna1Q9JJ94 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ssna1Q9JJ94 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssna1Q9JJ94 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.86■□□□□ 0.93
Ssna1Q9JJ94 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssna1Q9JJ94 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ssna1Q9JJ94 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ssna1Q9JJ94 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssna1Q9JJ94 Amer2-203ENSMUST00000225247 2662 ntBASIC20.83■□□□□ 0.92
Ssna1Q9JJ94 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ssna1Q9JJ94 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssna1Q9JJ94 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssna1Q9JJ94 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssna1Q9JJ94 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssna1Q9JJ94 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.81■□□□□ 0.92
Ssna1Q9JJ94 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssna1Q9JJ94 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssna1Q9JJ94 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssna1Q9JJ94 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ssna1Q9JJ94 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssna1Q9JJ94 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ssna1Q9JJ94 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ssna1Q9JJ94 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ssna1Q9JJ94 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssna1Q9JJ94 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssna1Q9JJ94 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssna1Q9JJ94 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssna1Q9JJ94 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Ssna1Q9JJ94 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ssna1Q9JJ94 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssna1Q9JJ94 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ssna1Q9JJ94 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssna1Q9JJ94 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.74■□□□□ 0.91
Ssna1Q9JJ94 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssna1Q9JJ94 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ssna1Q9JJ94 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.72■□□□□ 0.91
Ssna1Q9JJ94 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ssna1Q9JJ94 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssna1Q9JJ94 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssna1Q9JJ94 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssna1Q9JJ94 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssna1Q9JJ94 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssna1Q9JJ94 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssna1Q9JJ94 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ssna1Q9JJ94 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssna1Q9JJ94 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssna1Q9JJ94 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.66■□□□□ 0.9
Ssna1Q9JJ94 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms