Protein–RNA interactions for Protein: Q9D1Y9

Shisal2b, Protein shisa-like-2B, mousemouse

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisal2bQ9D1Y9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shisal2bQ9D1Y9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shisal2bQ9D1Y9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shisal2bQ9D1Y9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shisal2bQ9D1Y9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Shisal2bQ9D1Y9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shisal2bQ9D1Y9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shisal2bQ9D1Y9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shisal2bQ9D1Y9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shisal2bQ9D1Y9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shisal2bQ9D1Y9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shisal2bQ9D1Y9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shisal2bQ9D1Y9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shisal2bQ9D1Y9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shisal2bQ9D1Y9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shisal2bQ9D1Y9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Shisal2bQ9D1Y9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shisal2bQ9D1Y9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shisal2bQ9D1Y9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Shisal2bQ9D1Y9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisal2bQ9D1Y9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisal2bQ9D1Y9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shisal2bQ9D1Y9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisal2bQ9D1Y9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.09■□□□□ 0.81
Shisal2bQ9D1Y9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisal2bQ9D1Y9 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.08■□□□□ 0.81
Shisal2bQ9D1Y9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shisal2bQ9D1Y9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Shisal2bQ9D1Y9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisal2bQ9D1Y9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Shisal2bQ9D1Y9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Shisal2bQ9D1Y9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shisal2bQ9D1Y9 Amer2-203ENSMUST00000225247 2662 ntBASIC20.01■□□□□ 0.79
Shisal2bQ9D1Y9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisal2bQ9D1Y9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shisal2bQ9D1Y9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisal2bQ9D1Y9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shisal2bQ9D1Y9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shisal2bQ9D1Y9 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.98■□□□□ 0.79
Shisal2bQ9D1Y9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Shisal2bQ9D1Y9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shisal2bQ9D1Y9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.96■□□□□ 0.79
Shisal2bQ9D1Y9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisal2bQ9D1Y9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shisal2bQ9D1Y9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisal2bQ9D1Y9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shisal2bQ9D1Y9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisal2bQ9D1Y9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.92■□□□□ 0.78
Shisal2bQ9D1Y9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.92■□□□□ 0.78
Shisal2bQ9D1Y9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Shisal2bQ9D1Y9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisal2bQ9D1Y9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shisal2bQ9D1Y9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shisal2bQ9D1Y9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shisal2bQ9D1Y9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisal2bQ9D1Y9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisal2bQ9D1Y9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisal2bQ9D1Y9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Shisal2bQ9D1Y9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.88■□□□□ 0.77
Shisal2bQ9D1Y9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shisal2bQ9D1Y9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisal2bQ9D1Y9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.87■□□□□ 0.77
Shisal2bQ9D1Y9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisal2bQ9D1Y9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisal2bQ9D1Y9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shisal2bQ9D1Y9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.85■□□□□ 0.77
Shisal2bQ9D1Y9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisal2bQ9D1Y9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Shisal2bQ9D1Y9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisal2bQ9D1Y9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shisal2bQ9D1Y9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.83■□□□□ 0.77
Shisal2bQ9D1Y9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Shisal2bQ9D1Y9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisal2bQ9D1Y9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisal2bQ9D1Y9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisal2bQ9D1Y9 Gm25238-201ENSMUST00000174914 89 ntBASIC19.8■□□□□ 0.76
Shisal2bQ9D1Y9 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.8■□□□□ 0.76
Shisal2bQ9D1Y9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisal2bQ9D1Y9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shisal2bQ9D1Y9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.79■□□□□ 0.76
Shisal2bQ9D1Y9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisal2bQ9D1Y9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shisal2bQ9D1Y9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shisal2bQ9D1Y9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Shisal2bQ9D1Y9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shisal2bQ9D1Y9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Shisal2bQ9D1Y9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shisal2bQ9D1Y9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shisal2bQ9D1Y9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shisal2bQ9D1Y9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shisal2bQ9D1Y9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisal2bQ9D1Y9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Shisal2bQ9D1Y9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shisal2bQ9D1Y9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shisal2bQ9D1Y9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Shisal2bQ9D1Y9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisal2bQ9D1Y9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Shisal2bQ9D1Y9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisal2bQ9D1Y9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.69■□□□□ 0.74
Shisal2bQ9D1Y9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms