Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mrpl55Q9CZ83 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.94■□□□□ 0.3
Mrpl55Q9CZ83 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Mrpl55Q9CZ83 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.91■□□□□ 0.3
Mrpl55Q9CZ83 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mrpl55Q9CZ83 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mrpl55Q9CZ83 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Mrpl55Q9CZ83 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mrpl55Q9CZ83 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mrpl55Q9CZ83 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mrpl55Q9CZ83 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mrpl55Q9CZ83 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl55Q9CZ83 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl55Q9CZ83 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.84■□□□□ 0.29
Mrpl55Q9CZ83 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl55Q9CZ83 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl55Q9CZ83 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl55Q9CZ83 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl55Q9CZ83 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.81■□□□□ 0.28
Mrpl55Q9CZ83 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Mrpl55Q9CZ83 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl55Q9CZ83 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl55Q9CZ83 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl55Q9CZ83 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.79■□□□□ 0.28
Mrpl55Q9CZ83 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl55Q9CZ83 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl55Q9CZ83 Gm27322-201ENSMUST00000184007 104 ntBASIC16.78■□□□□ 0.28
Mrpl55Q9CZ83 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Mrpl55Q9CZ83 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl55Q9CZ83 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl55Q9CZ83 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl55Q9CZ83 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mrpl55Q9CZ83 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mrpl55Q9CZ83 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.75■□□□□ 0.27
Mrpl55Q9CZ83 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl55Q9CZ83 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl55Q9CZ83 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl55Q9CZ83 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl55Q9CZ83 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mrpl55Q9CZ83 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl55Q9CZ83 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl55Q9CZ83 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.69■□□□□ 0.26
Mrpl55Q9CZ83 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mrpl55Q9CZ83 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.68■□□□□ 0.26
Mrpl55Q9CZ83 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl55Q9CZ83 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mrpl55Q9CZ83 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl55Q9CZ83 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl55Q9CZ83 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl55Q9CZ83 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl55Q9CZ83 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Mrpl55Q9CZ83 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl55Q9CZ83 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl55Q9CZ83 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl55Q9CZ83 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl55Q9CZ83 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl55Q9CZ83 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.61■□□□□ 0.25
Mrpl55Q9CZ83 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Mrpl55Q9CZ83 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mrpl55Q9CZ83 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Mrpl55Q9CZ83 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mrpl55Q9CZ83 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Mrpl55Q9CZ83 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl55Q9CZ83 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl55Q9CZ83 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl55Q9CZ83 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl55Q9CZ83 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.56■□□□□ 0.24
Mrpl55Q9CZ83 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Mrpl55Q9CZ83 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl55Q9CZ83 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl55Q9CZ83 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Mrpl55Q9CZ83 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Mrpl55Q9CZ83 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Mrpl55Q9CZ83 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mrpl55Q9CZ83 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mrpl55Q9CZ83 Gm24804-201ENSMUST00000174982 85 ntBASIC16.47■□□□□ 0.23
Mrpl55Q9CZ83 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl55Q9CZ83 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.46■□□□□ 0.23
Mrpl55Q9CZ83 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl55Q9CZ83 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl55Q9CZ83 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mrpl55Q9CZ83 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Mrpl55Q9CZ83 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mrpl55Q9CZ83 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.45■□□□□ 0.22
Mrpl55Q9CZ83 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mrpl55Q9CZ83 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.44■□□□□ 0.22
Mrpl55Q9CZ83 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mrpl55Q9CZ83 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Mrpl55Q9CZ83 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.43■□□□□ 0.22
Mrpl55Q9CZ83 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mrpl55Q9CZ83 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mrpl55Q9CZ83 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mrpl55Q9CZ83 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mrpl55Q9CZ83 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mrpl55Q9CZ83 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms