Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Swsap1Q8VCI7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Swsap1Q8VCI7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Swsap1Q8VCI7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.24■■□□□ 1.31
Swsap1Q8VCI7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Swsap1Q8VCI7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Swsap1Q8VCI7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Swsap1Q8VCI7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Swsap1Q8VCI7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.22■■□□□ 1.31
Swsap1Q8VCI7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Swsap1Q8VCI7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Swsap1Q8VCI7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Swsap1Q8VCI7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Swsap1Q8VCI7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Swsap1Q8VCI7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.15■■□□□ 1.3
Swsap1Q8VCI7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Swsap1Q8VCI7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Swsap1Q8VCI7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.14■■□□□ 1.29
Swsap1Q8VCI7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Swsap1Q8VCI7 Zfp131-205ENSMUST00000223812 663 ntBASIC23.07■■□□□ 1.28
Swsap1Q8VCI7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Swsap1Q8VCI7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Swsap1Q8VCI7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.05■■□□□ 1.28
Swsap1Q8VCI7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Swsap1Q8VCI7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Swsap1Q8VCI7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Swsap1Q8VCI7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Swsap1Q8VCI7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Swsap1Q8VCI7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Swsap1Q8VCI7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Swsap1Q8VCI7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Swsap1Q8VCI7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23■■□□□ 1.27
Swsap1Q8VCI7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Swsap1Q8VCI7 Gm16148-201ENSMUST00000119653 893 ntBASIC22.98■■□□□ 1.27
Swsap1Q8VCI7 Peli2-204ENSMUST00000226513 1320 ntBASIC22.97■■□□□ 1.27
Swsap1Q8VCI7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Swsap1Q8VCI7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Swsap1Q8VCI7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Swsap1Q8VCI7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Swsap1Q8VCI7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.95■■□□□ 1.26
Swsap1Q8VCI7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Swsap1Q8VCI7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Swsap1Q8VCI7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Swsap1Q8VCI7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Swsap1Q8VCI7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Swsap1Q8VCI7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.92■■□□□ 1.26
Swsap1Q8VCI7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Swsap1Q8VCI7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Swsap1Q8VCI7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.91■■□□□ 1.26
Swsap1Q8VCI7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Swsap1Q8VCI7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Swsap1Q8VCI7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Swsap1Q8VCI7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.87■■□□□ 1.25
Swsap1Q8VCI7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Swsap1Q8VCI7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Swsap1Q8VCI7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Swsap1Q8VCI7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Swsap1Q8VCI7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Swsap1Q8VCI7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Swsap1Q8VCI7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Swsap1Q8VCI7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.8■■□□□ 1.24
Swsap1Q8VCI7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.23
Swsap1Q8VCI7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Swsap1Q8VCI7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Swsap1Q8VCI7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Swsap1Q8VCI7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Swsap1Q8VCI7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Swsap1Q8VCI7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
Swsap1Q8VCI7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Swsap1Q8VCI7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Swsap1Q8VCI7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
Swsap1Q8VCI7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Swsap1Q8VCI7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Swsap1Q8VCI7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Swsap1Q8VCI7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Swsap1Q8VCI7 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.7■■□□□ 1.23
Swsap1Q8VCI7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Swsap1Q8VCI7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Swsap1Q8VCI7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Swsap1Q8VCI7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Swsap1Q8VCI7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Swsap1Q8VCI7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.65■■□□□ 1.22
Swsap1Q8VCI7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Swsap1Q8VCI7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.64■■□□□ 1.21
Swsap1Q8VCI7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Swsap1Q8VCI7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Swsap1Q8VCI7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Swsap1Q8VCI7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Swsap1Q8VCI7 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.62■■□□□ 1.21
Swsap1Q8VCI7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Swsap1Q8VCI7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Swsap1Q8VCI7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Swsap1Q8VCI7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.6■■□□□ 1.21
Swsap1Q8VCI7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Swsap1Q8VCI7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Swsap1Q8VCI7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Swsap1Q8VCI7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Swsap1Q8VCI7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.55■■□□□ 1.2
Swsap1Q8VCI7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Swsap1Q8VCI7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms