Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.31■■□□□ 1.64
Cdt1Q8R4E9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdt1Q8R4E9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cdt1Q8R4E9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Cdt1Q8R4E9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Cdt1Q8R4E9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cdt1Q8R4E9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cdt1Q8R4E9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cdt1Q8R4E9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cdt1Q8R4E9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cdt1Q8R4E9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdt1Q8R4E9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cdt1Q8R4E9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Cdt1Q8R4E9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cdt1Q8R4E9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cdt1Q8R4E9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Cdt1Q8R4E9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cdt1Q8R4E9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cdt1Q8R4E9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cdt1Q8R4E9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.06■■□□□ 1.6
Cdt1Q8R4E9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cdt1Q8R4E9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.04■■□□□ 1.6
Cdt1Q8R4E9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cdt1Q8R4E9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cdt1Q8R4E9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cdt1Q8R4E9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25■■□□□ 1.59
Cdt1Q8R4E9 Mipep-204ENSMUST00000225043 1548 ntBASIC25■■□□□ 1.59
Cdt1Q8R4E9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Cdt1Q8R4E9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.98■■□□□ 1.59
Cdt1Q8R4E9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cdt1Q8R4E9 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.97■■□□□ 1.59
Cdt1Q8R4E9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cdt1Q8R4E9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cdt1Q8R4E9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cdt1Q8R4E9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Cdt1Q8R4E9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Cdt1Q8R4E9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cdt1Q8R4E9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cdt1Q8R4E9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cdt1Q8R4E9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.91■■□□□ 1.58
Cdt1Q8R4E9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cdt1Q8R4E9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Cdt1Q8R4E9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cdt1Q8R4E9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.89■■□□□ 1.58
Cdt1Q8R4E9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cdt1Q8R4E9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
Cdt1Q8R4E9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cdt1Q8R4E9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cdt1Q8R4E9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.84■■□□□ 1.57
Cdt1Q8R4E9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.84■■□□□ 1.57
Cdt1Q8R4E9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cdt1Q8R4E9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Cdt1Q8R4E9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Cdt1Q8R4E9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.79■■□□□ 1.56
Cdt1Q8R4E9 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.79■■□□□ 1.56
Cdt1Q8R4E9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdt1Q8R4E9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Cdt1Q8R4E9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdt1Q8R4E9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Cdt1Q8R4E9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Cdt1Q8R4E9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.74■■□□□ 1.55
Cdt1Q8R4E9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cdt1Q8R4E9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.72■■□□□ 1.55
Cdt1Q8R4E9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Cdt1Q8R4E9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cdt1Q8R4E9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.71■■□□□ 1.55
Cdt1Q8R4E9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Cdt1Q8R4E9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Cdt1Q8R4E9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.7■■□□□ 1.54
Cdt1Q8R4E9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cdt1Q8R4E9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cdt1Q8R4E9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Cdt1Q8R4E9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.69■■□□□ 1.54
Cdt1Q8R4E9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Cdt1Q8R4E9 Gm45855-201ENSMUST00000212546 880 ntBASIC24.67■■□□□ 1.54
Cdt1Q8R4E9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cdt1Q8R4E9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Cdt1Q8R4E9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cdt1Q8R4E9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cdt1Q8R4E9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cdt1Q8R4E9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cdt1Q8R4E9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cdt1Q8R4E9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdt1Q8R4E9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.59■■□□□ 1.53
Cdt1Q8R4E9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.57■■□□□ 1.52
Cdt1Q8R4E9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cdt1Q8R4E9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdt1Q8R4E9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.55■■□□□ 1.52
Cdt1Q8R4E9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdt1Q8R4E9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cdt1Q8R4E9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cdt1Q8R4E9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.53■■□□□ 1.52
Cdt1Q8R4E9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cdt1Q8R4E9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdt1Q8R4E9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cdt1Q8R4E9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cdt1Q8R4E9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdt1Q8R4E9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cdt1Q8R4E9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdt1Q8R4E9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms